RNA–Protein interactions for RNA: ENST00000579378.1

AC011840.3-201, humanhuman

TSL 3 BASIC

Gene AC011840.3, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.3-201ENST00000579378 PCDH15Q96QU1 1955 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 SMG1Q96Q15 3661 aaKnown RBP8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 ZNF840PA6NDX5 716 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 TBCAO75347 108 aaKnown RBP8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 PPP1R37O75864 691 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 KAT7O95251 611 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 CFIP05156 583 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 SERPINF2P08697 491 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 BDNFP23560 247 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 LMO2P25791 158 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 PCSK1P29120 753 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 GRIK1P39086 918 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 EIF2DP41214 584 aaKnown RBP8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 DPP6P42658 865 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 ATXN3P54252 364 aaPredicted RBP8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 RBP5P82980 135 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 GFPT1Q06210 699 aaPredicted RBP8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 KCNA1Q09470 495 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 EOGTQ5NDL2 527 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 LYSMD4Q5XG99 296 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 LMBRD2Q68DH5 695 aaPredicted RBP8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 VSTM1Q6UX27 236 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 C4orf50Q6ZRC1 276 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 DENND5BQ6ZUT9 1274 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 DPH6Q7L8W6 267 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 RAB44Q7Z6P3 723 aaPredicted RBP8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 PROSER1Q86XN7 944 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 BRSK2Q8IWQ3 736 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 ADGRF2Q8IZF7 708 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 PGBD3Q8N328 593 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 HDDC3Q8N4P3 179 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 DEFB119Q8N690 84 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 TOP6BLQ8N6T0 577 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 CEP76Q8TAP6 659 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 HMGB4Q8WW32 186 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 CEP295NLQ96MC4 621 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 BCCIPQ9P287 314 aaKnown RBP eCLIP8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 SIX4Q9UIU6 781 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 ATXN2Q99700 1313 aaKnown RBP8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 SHROOM3Q8TF72 1996 aa8.97□□□□□ -0.97
AC011840.3-201ENST00000579378 GOLGA8IPA6NC78 632 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 GOLGA8JA6NMD2 632 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 SLC9A3R1O14745 358 aaPredicted RBP8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 SCAMP3O14828 347 aaKnown RBP8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 AP5Z1O43299 807 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 EIF5BO60841 1220 aaKnown RBP8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 OPHN1O60890 802 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 LDHAP00338 332 aaKnown RBP8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 ABL1P00519 1130 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 KRT19P08727 400 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 PDGFRBP09619 1106 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 CD59P13987 128 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 HOXD12P35452 270 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 GRIA2P42262 883 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 PPP3CCP48454 512 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 GRIN1Q05586 938 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 RESTQ13127 1097 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 C19orf48Q6RUI8 117 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 DYMQ7RTS9 669 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 LIMS2Q7Z4I7 341 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 C12orf40Q86WS4 652 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 SFR1Q86XK3 245 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 KRI1Q8N9T8 703 aaKnown RBP8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 KBTBD7Q8WVZ9 684 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 LARP4BQ92615 738 aaKnown RBP8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 HVCN1Q96D96 273 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 SAAL1Q96ER3 474 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 KIF2CQ99661 725 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 SYT15Q9BQS2 421 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 TTLL2Q9BWV7 592 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 GTPBP2Q9BX10 602 aaKnown RBP8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 CAPN10Q9HC96 672 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 PDE11AQ9HCR9 933 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 CRTAC1Q9NQ79 661 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 ARHGEF4Q9NR80 690 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 SMPD4Q9NXE4 827 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 ITGA11Q9UKX5 1188 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 CDH9Q9ULB4 789 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 CPQQ9Y646 472 aa8.96□□□□□ -0.98
AC011840.3-201ENST00000579378 TCRBV21S2A2A0A5A6 115 aa8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 ARHGAP33O14559 1287 aa8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 OLFM2O95897 454 aa8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 ADH1CP00326 375 aa8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 OAS1P00973 400 aaKnown RBP8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 GARTP22102 1010 aa8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 LONP1P36776 959 aaKnown RBP8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 PSMC1P62191 440 aaKnown RBP8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 NOP14P78316 857 aaKnown RBP8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 CYP27A1Q02318 531 aa8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 RPL6Q02878 288 aaKnown RBP8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 ZNF33AQ06730 810 aa8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 SCAPQ12770 1279 aa8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 TAF10Q12962 218 aa8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 HNRNPDQ14103 355 aaKnown RBP8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 TRIP6Q15654 476 aaKnown RBP8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 MAPRE1Q15691 268 aaKnown RBP8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 ZNF423Q2M1K9 1284 aa8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 SOWAHCQ53LP3 525 aaPredicted RBP8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 LY6G5CQ5SRR4 150 aa8.95□□□□□ -0.98
AC011840.3-201ENST00000579378 SLC36A4Q6YBV0 504 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms