RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 IFRD2Q12894 506 aaPredicted RBP16.88■□□□□ 0.29
CRLF3-203ENST00000578692 NFIL3Q16649 462 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 C1orf220Q5T0J3 134 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 HEATR6Q6AI08 1181 aaKnown RBP16.88■□□□□ 0.29
CRLF3-203ENST00000578692 PAQR9Q6ZVX9 377 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 LONP2Q86WA8 852 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 GUF1Q8N442 669 aaKnown RBP16.88■□□□□ 0.29
CRLF3-203ENST00000578692 ATP8B3O60423 1300 aa16.87■□□□□ 0.29
CRLF3-203ENST00000578692 LEFTY2O00292 366 aa16.87■□□□□ 0.29
CRLF3-203ENST00000578692 EGFP01133 1207 aa16.87■□□□□ 0.29
CRLF3-203ENST00000578692 RPL13P26373 211 aaKnown RBP16.87■□□□□ 0.29
CRLF3-203ENST00000578692 HOXA6P31267 233 aa16.87■□□□□ 0.29
CRLF3-203ENST00000578692 SIM2Q14190 667 aaPredicted RBP16.87■□□□□ 0.29
CRLF3-203ENST00000578692 PKN3Q6P5Z2 889 aa16.87■□□□□ 0.29
CRLF3-203ENST00000578692 PRR23BQ6ZRT6 265 aa16.87■□□□□ 0.29
CRLF3-203ENST00000578692 ACOT1Q86TX2 421 aa16.87■□□□□ 0.29
CRLF3-203ENST00000578692 FAM35AQ86V20 835 aa16.87■□□□□ 0.29
CRLF3-203ENST00000578692 CD101Q93033 1021 aa16.87■□□□□ 0.29
CRLF3-203ENST00000578692 RMDN1Q96DB5 314 aa16.87■□□□□ 0.29
CRLF3-203ENST00000578692 GMEB2Q9UKD1 530 aa16.87■□□□□ 0.29
CRLF3-203ENST00000578692 RNF40O75150 1001 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 AKAP3O75969 853 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 OLFM2O95897 454 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 ASS1P00966 412 aaKnown RBP16.86■□□□□ 0.29
CRLF3-203ENST00000578692 OAS1P00973 400 aaKnown RBP16.86■□□□□ 0.29
CRLF3-203ENST00000578692 HLA-DRAP01903 254 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 KRT13P13646 458 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 HOXC13P31276 330 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 PSMC2P35998 433 aaKnown RBP16.86■□□□□ 0.29
CRLF3-203ENST00000578692 NDST1P52848 882 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 FOXK2Q01167 660 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 ADAM9Q13443 819 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 LPAL2Q16609 132 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 FBXO43Q4G163 708 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 NAIF1Q69YI7 327 aaPredicted RBP16.86■□□□□ 0.29
CRLF3-203ENST00000578692 SPOPLQ6IQ16 392 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 INTS8Q75QN2 995 aaKnown RBP16.86■□□□□ 0.29
CRLF3-203ENST00000578692 UNC93AQ86WB7 457 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 CRYBG2Q8N1P7 616 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 PDZD8Q8NEN9 1154 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 OVCA2Q8WZ82 227 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 FBXO32Q969P5 355 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 SMARCD1Q96GM5 515 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 CCDC34Q96HJ3 373 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 CHORDC1Q9UHD1 332 aaPredicted RBP16.86■□□□□ 0.29
CRLF3-203ENST00000578692 SLC8A2Q9UPR5 921 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 CPQQ9Y646 472 aa16.86■□□□□ 0.29
CRLF3-203ENST00000578692 HELZP42694 1942 aaKnown RBP16.85■□□□□ 0.29
CRLF3-203ENST00000578692 TNFRSF10BO14763 440 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 AP1G2O75843 785 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 NFATC1O95644 943 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 PIK3CAP42336 1068 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 GCLMP48507 274 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 SRSF5Q13243 272 aaKnown RBP16.85■□□□□ 0.29
CRLF3-203ENST00000578692 LAIR1Q6GTX8 287 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 ERMP1Q7Z2K6 904 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 WDR5BQ86VZ2 330 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 FAM186BQ8IYM0 893 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 ADGRG2Q8IZP9 1017 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 FUKQ8N0W3 1084 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 KIAA1958Q8N8K9 716 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 SCAMP5Q8TAC9 235 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 DMAP1Q9NPF5 467 aaPredicted RBP16.85■□□□□ 0.29
CRLF3-203ENST00000578692 COMMD8Q9NX08 183 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 IL37Q9NZH6 218 aa16.85■□□□□ 0.29
CRLF3-203ENST00000578692 EP300Q09472 2414 aaPredicted RBP16.84■□□□□ 0.29
CRLF3-203ENST00000578692 ATG2BQ96BY7 2078 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 TRIM49P0CI25 452 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 TRIM49CP0CI26 452 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 MBL2P11226 248 aaPredicted RBP16.84■□□□□ 0.29
CRLF3-203ENST00000578692 ASPAP45381 313 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 SLC5A3P53794 718 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 ENPEPQ07075 957 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 PPP3CAQ08209 521 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 ORC1Q13415 861 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 BECN1Q14457 450 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 FILIP1Q7Z7B0 1213 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 SMOQ99835 787 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 IMPG2Q9BZV3 1241 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.84■□□□□ 0.299e-10■■■■■ 115.4
CRLF3-203ENST00000578692 SMPD4Q9NXE4 827 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 OTOGLQ3ZCN5 2332 aa16.84■□□□□ 0.29
CRLF3-203ENST00000578692 SLC9A3R1O14745 358 aaPredicted RBP16.83■□□□□ 0.28
CRLF3-203ENST00000578692 BEST1O76090 585 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 CCDC130P13994 396 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 TRIM21P19474 475 aaKnown RBP16.83■□□□□ 0.28
CRLF3-203ENST00000578692 TGM1P22735 817 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 PXNP49023 591 aaPredicted RBP16.83■□□□□ 0.28
CRLF3-203ENST00000578692 PUM1Q14671 1186 aaKnown RBP eCLIP16.83■□□□□ 0.28
CRLF3-203ENST00000578692 ZCWPW2Q504Y3 356 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 HECTD3Q5T447 861 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 SNX30Q5VWJ9 437 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 DDX42Q86XP3 938 aaKnown RBP eCLIP16.83■□□□□ 0.28
CRLF3-203ENST00000578692 CAMKK1Q8N5S9 505 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 C12orf29Q8N999 325 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 ZMIZ2Q8NF64 920 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 RPLP0P6Q8NHW5 317 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 SLC2A14Q8TDB8 520 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 TAS1R2Q8TE23 839 aa16.83■□□□□ 0.28
CRLF3-203ENST00000578692 EZH1Q92800 747 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms