RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 IPO4Q8TEX9 1081 aaKnown RBP12.8□□□□□ -0.36
IFT20-207ENST00000578547 SLC35F5Q8WV83 523 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 SFXN1Q9H9B4 322 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 LRRC4Q9HBW1 653 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 SPTLC3Q9NUV7 552 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 DZANK1Q9NVP4 752 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 TAS2R14Q9NYV8 317 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 TJP2Q9UDY2 1190 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 PATJQ8NI35 1801 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.79□□□□□ -0.36
IFT20-207ENST00000578547 HHLA1C9JL84 531 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 E5RJQ4 531 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 TBX10O75333 385 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 FECHP22830 423 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 CDH5P33151 784 aaPredicted RBP12.79□□□□□ -0.36
IFT20-207ENST00000578547 TKTL1P51854 596 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 USP46P62068 366 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 MTF1Q14872 753 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 PTPN20Q4JDL3 420 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 C2CD6Q53TS8 623 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 RARS2Q5T160 578 aaKnown RBP12.79□□□□□ -0.36
IFT20-207ENST00000578547 CYP4A22Q5TCH4 519 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 TMC5Q6UXY8 1006 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 MMS22LQ6ZRQ5 1243 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 DENND5BQ6ZUT9 1274 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 ERICH1Q86X53 443 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 TMEM139Q8IV31 216 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 LRRC8AQ8IWT6 810 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 NUP93Q8N1F7 819 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 MSANTD4Q8NCY6 345 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 SCAMP5Q8TAC9 235 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 PPP1R13BQ96KQ4 1090 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 SPATA17Q96L03 361 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 CPXM1Q96SM3 734 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 CORO1BQ9BR76 489 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 C11orf70Q9BRQ4 267 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 ULBP1Q9BZM6 244 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 MIS12Q9H081 205 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 PNPLA8Q9NP80 782 aa12.79□□□□□ -0.36
IFT20-207ENST00000578547 BRWD1Q9NSI6 2320 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 CCDC195A0A1B0GUA6 201 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 TNFRSF10BO14763 440 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 NRDCO43847 1150 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 XYLBO75191 536 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 ERBB2P04626 1255 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 HNRNPA1P09651 372 aaKnown RBP eCLIP12.78□□□□□ -0.36
IFT20-207ENST00000578547 CSH1P0DML2 217 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 CSH2P0DML3 217 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 UNGP13051 313 aaPredicted RBP12.78□□□□□ -0.36
IFT20-207ENST00000578547 HOXA9P31269 272 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 CYLC1P35663 651 aaPredicted RBP12.78□□□□□ -0.36
IFT20-207ENST00000578547 ACADSBP45954 432 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 CENPCQ03188 943 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 CLUL1Q15846 466 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 SLC18A3Q16572 532 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 ASTE1Q2TB18 679 aaPredicted RBP12.78□□□□□ -0.36
IFT20-207ENST00000578547 CCDC122Q5T0U0 273 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 ACAD10Q6JQN1 1059 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 RAD9BQ6WBX8 426 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 PHLDB2Q86SQ0 1253 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 ITIH5Q86UX2 942 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 CCDC112Q8NEF3 446 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 STK32AQ8WU08 396 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 KCTD13Q8WZ19 329 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 SMG7Q92540 1137 aaKnown RBP12.78□□□□□ -0.36
IFT20-207ENST00000578547 PSMG2Q969U7 264 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 ZNF707Q96C28 371 aaPredicted RBP12.78□□□□□ -0.36
IFT20-207ENST00000578547 MSLNLQ96KJ4 702 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 ZNF512Q96ME7 567 aaPredicted RBP12.78□□□□□ -0.36
IFT20-207ENST00000578547 PPP1R9BQ96SB3 815 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 SLC4A5Q9BY07 1137 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 UBXN6Q9BZV1 441 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 S1PR5Q9H228 398 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 UBE2ZQ9H832 354 aaPredicted RBP12.78□□□□□ -0.36
IFT20-207ENST00000578547 PIDD1Q9HB75 910 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 PRDM6Q9NQX0 595 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 HCFC1R1Q9NWW0 138 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 ZDHHC7Q9NXF8 308 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 ADAM22Q9P0K1 906 aa12.78□□□□□ -0.36
IFT20-207ENST00000578547 MTCL1Q9Y4B5 1905 aaKnown RBP12.78□□□□□ -0.36
IFT20-207ENST00000578547 REV3LO60673 3130 aa12.77□□□□□ -0.36
IFT20-207ENST00000578547 MYO16Q9Y6X6 1858 aa12.77□□□□□ -0.37
IFT20-207ENST00000578547 GOLGA8SH3BPF8 625 aa12.77□□□□□ -0.37
IFT20-207ENST00000578547 H3BQ06 376 aaPredicted RBP12.77□□□□□ -0.37
IFT20-207ENST00000578547 ATMINO43313 823 aaPredicted RBP12.77□□□□□ -0.37
IFT20-207ENST00000578547 RTN2O75298 545 aa12.77□□□□□ -0.37
IFT20-207ENST00000578547 GABBR2O75899 941 aa12.77□□□□□ -0.37
IFT20-207ENST00000578547 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
IFT20-207ENST00000578547 IPO7O95373 1038 aaKnown RBP12.77□□□□□ -0.37
IFT20-207ENST00000578547 FTLP02792 175 aaPredicted RBP12.77□□□□□ -0.37
IFT20-207ENST00000578547 USP17L7P0C7H9 530 aa12.77□□□□□ -0.37
IFT20-207ENST00000578547 HOXB8P17481 243 aaPredicted RBP12.77□□□□□ -0.37
IFT20-207ENST00000578547 ABCB4P21439 1286 aa12.77□□□□□ -0.37
IFT20-207ENST00000578547 KCNA5P22460 613 aa12.77□□□□□ -0.37
IFT20-207ENST00000578547 YWHAQP27348 245 aa12.77□□□□□ -0.37
IFT20-207ENST00000578547 SNX16P57768 344 aa12.77□□□□□ -0.37
IFT20-207ENST00000578547 OR6B2Q6IFH4 312 aa12.77□□□□□ -0.37
IFT20-207ENST00000578547 ALKBH5Q6P6C2 394 aaKnown RBP12.77□□□□□ -0.37
IFT20-207ENST00000578547 FAM183BPQ6ZVS7 135 aa12.77□□□□□ -0.37
IFT20-207ENST00000578547 RTL10Q7L3V2 364 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms