RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 RAB33AQ14088 237 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 RAB41Q5JT25 222 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 EFHC1Q5JVL4 640 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 DNTTIP2Q5QJE6 756 aaKnown RBP14.12□□□□□ -0.15
SRSF1-202ENST00000578430 CYP4A22Q5TCH4 519 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 OR6B2Q6IFH4 312 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 DCUN1D2Q6PH85 259 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 PRSS55Q6UWB4 352 aaPredicted RBP14.12□□□□□ -0.15
SRSF1-202ENST00000578430 DAAM2Q86T65 1068 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 SIX6OS1Q8N1H7 587 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 ZMIZ2Q8NF64 920 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 FNIP1Q8TF40 1166 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 WDR24Q96S15 920 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 NAPGQ99747 312 aaPredicted RBP14.12□□□□□ -0.15
SRSF1-202ENST00000578430 C11orf84Q9BUA3 381 aaPredicted RBP14.12□□□□□ -0.15
SRSF1-202ENST00000578430 CNGB3Q9NQW8 809 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 ASNSD1Q9NWL6 643 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 ABI2Q9NYB9 513 aaPredicted RBP14.12□□□□□ -0.15
SRSF1-202ENST00000578430 AFF4Q9UHB7 1163 aaKnown RBP14.12□□□□□ -0.15
SRSF1-202ENST00000578430 IP6K2Q9UHH9 426 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 ANAPC7Q9UJX3 599 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 CDY1Q9Y6F8 540 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 NLRC5Q86WI3 1866 aa14.12□□□□□ -0.15
SRSF1-202ENST00000578430 PTPRDP23468 1912 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.11□□□□□ -0.15
SRSF1-202ENST00000578430 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.11□□□□□ -0.15
SRSF1-202ENST00000578430 MTMR11A4FU01 709 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 HHLA1C9JL84 531 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 PAPSS1O43252 624 aaPredicted RBP14.11□□□□□ -0.15
SRSF1-202ENST00000578430 LILRB3O75022 631 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 BEST1O76090 585 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 DESP17661 470 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 CYP2F1P24903 491 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 MAN1A1P33908 653 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 OR1D2P34982 312 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 GRIK1P39086 918 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 SLC1A1P43005 524 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 TUFMP49411 452 aaKnown RBP14.11□□□□□ -0.15
SRSF1-202ENST00000578430 RPL10AP62906 217 aaKnown RBP14.11□□□□□ -0.15
SRSF1-202ENST00000578430 ROR1Q01973 937 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 TUBB2AQ13885 445 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 ACAP1Q15027 740 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 RAB30Q15771 203 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 C2CD6Q53TS8 623 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 FAM102AQ5T9C2 384 aaPredicted RBP14.11□□□□□ -0.15
SRSF1-202ENST00000578430 OLFML1Q6UWY5 402 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 RSPO2Q6UXX9 243 aaPredicted RBP14.11□□□□□ -0.15
SRSF1-202ENST00000578430 FAM183BPQ6ZVS7 135 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 SLC26A9Q7LBE3 791 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 IRGQQ8WZA9 623 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 TGS1Q96RS0 853 aaKnown RBP14.11□□□□□ -0.15
SRSF1-202ENST00000578430 NCAPGQ9BPX3 1015 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 CLSTN3Q9BQT9 956 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 TUBB2BQ9BVA1 445 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 TRIM62Q9BVG3 475 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 COMMD8Q9NX08 183 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 MTMR10Q9NXD2 777 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 TJP2Q9UDY2 1190 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 IRAK3Q9Y616 596 aa14.11□□□□□ -0.15
SRSF1-202ENST00000578430 FAM170AA1A519 330 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 F8VP50 259 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 GOLGA8SH3BPF8 625 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 C2CD2LO14523 706 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 PROSCO94903 275 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 ABLIM3O94929 683 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 C1RP00736 705 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 HAPLN1P10915 354 aaPredicted RBP14.1□□□□□ -0.15
SRSF1-202ENST00000578430 LCP1P13796 627 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 NDUFV1P49821 464 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 TKTL1P51854 596 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 RABGGTBP53611 331 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 CACNA2D1P54289 1103 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 ARPP19P56211 112 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 ERVK-21P61565 698 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 MRPS5P82675 430 aaKnown RBP14.1□□□□□ -0.15
SRSF1-202ENST00000578430 ADIGQ0VDE8 80 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 PIGHQ14442 188 aaPredicted RBP14.1□□□□□ -0.15
SRSF1-202ENST00000578430 MESDQ14696 234 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 MEI1Q5TIA1 1274 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 PM20D1Q6GTS8 502 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 PDE12Q6L8Q7 609 aaKnown RBP14.1□□□□□ -0.15
SRSF1-202ENST00000578430 RNF19BQ6ZMZ0 732 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 PEX26Q7Z412 305 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 SCUBE3Q8IX30 993 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 NIPA2Q8N8Q9 360 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.1□□□□□ -0.15
SRSF1-202ENST00000578430 ZNF461Q8TAF7 563 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 SPATA17Q96L03 361 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 MCEEQ96PE7 176 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 KCNK16Q96T55 309 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 NGRNQ9NPE2 291 aaKnown RBP14.1□□□□□ -0.15
SRSF1-202ENST00000578430 RRAGDQ9NQL2 400 aaPredicted RBP14.1□□□□□ -0.15
SRSF1-202ENST00000578430 METTL5Q9NRN9 209 aaKnown RBP14.1□□□□□ -0.15
SRSF1-202ENST00000578430 TMEM30AQ9NV96 361 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 MSRAQ9UJ68 235 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 TMEM59LQ9UK28 342 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 AMFRQ9UKV5 643 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 USP3Q9Y6I4 520 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 MYH10P35580 1976 aa14.1□□□□□ -0.15
SRSF1-202ENST00000578430 WDR27A2RRH5 827 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms