RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 LRRC4Q9HBW1 653 aa14.63□□□□□ -0.07
LINC01543-201ENST00000578367 CNGB3Q9NQW8 809 aa14.63□□□□□ -0.07
LINC01543-201ENST00000578367 ASAH2Q9NR71 780 aa14.63□□□□□ -0.07
LINC01543-201ENST00000578367 TMEM30AQ9NV96 361 aa14.63□□□□□ -0.07
LINC01543-201ENST00000578367 CD207Q9UJ71 328 aa14.63□□□□□ -0.07
LINC01543-201ENST00000578367 SCML2Q9UQR0 700 aa14.63□□□□□ -0.07
LINC01543-201ENST00000578367 FAM50BQ9Y247 325 aa14.63□□□□□ -0.07
LINC01543-201ENST00000578367 MYO7AQ13402 2215 aa14.63□□□□□ -0.07
LINC01543-201ENST00000578367 CLUHO75153 1309 aa14.63□□□□□ -0.07
LINC01543-201ENST00000578367 CDH23Q9H251 3354 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 RFPL2O75678 378 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 BEST1O76090 585 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 MMEP08473 750 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 HMGA1P17096 107 aaKnown RBP14.62□□□□□ -0.07
LINC01543-201ENST00000578367 CHRNB2P17787 502 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 YWHAQP27348 245 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 SCNN1AP37088 669 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 GABRB2P47870 512 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 CACNA2D1P54289 1103 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 ADKP55263 362 aaKnown RBP14.62□□□□□ -0.07
LINC01543-201ENST00000578367 NOMO3P69849 1222 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 CENPCQ03188 943 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 PDCLQ13371 301 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 SKIV2LQ15477 1246 aaKnown RBP14.62□□□□□ -0.07
LINC01543-201ENST00000578367 CLEC16AQ2KHT3 1053 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 TDRD12Q587J7 1177 aaKnown RBP14.62□□□□□ -0.07
LINC01543-201ENST00000578367 TAF3Q5VWG9 929 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 SNX30Q5VWJ9 437 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 E4F1Q66K89 784 aaPredicted RBP14.62□□□□□ -0.07
LINC01543-201ENST00000578367 PM20D1Q6GTS8 502 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 DENND1BQ6P3S1 775 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 WDR59Q6PJI9 974 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 CCDC186Q7Z3E2 898 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 ZNF571Q7Z3V5 609 aaPredicted RBP14.62□□□□□ -0.07
LINC01543-201ENST00000578367 CCDC170Q8IYT3 715 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 ZNF276Q8N554 614 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 UBA3Q8TBC4 463 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 IPO4Q8TEX9 1081 aaKnown RBP14.62□□□□□ -0.07
LINC01543-201ENST00000578367 SLITRK1Q96PX8 696 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 GCNAQ96QF7 691 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 PIDD1Q9HB75 910 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 WDR6Q9NNW5 1121 aaKnown RBP14.62□□□□□ -0.07
LINC01543-201ENST00000578367 TMEM51Q9NW97 253 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 STRIP2Q9ULQ0 834 aa14.62□□□□□ -0.07
LINC01543-201ENST00000578367 CCL16O15467 120 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 GLI1P08151 1106 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 UNGP13051 313 aaPredicted RBP14.61□□□□□ -0.07
LINC01543-201ENST00000578367 DDX6P26196 483 aaKnown RBP eCLIP14.61□□□□□ -0.07
LINC01543-201ENST00000578367 NSFP46459 744 aaKnown RBP14.61□□□□□ -0.07
LINC01543-201ENST00000578367 GSCP56915 257 aaPredicted RBP14.61□□□□□ -0.07
LINC01543-201ENST00000578367 SMAD4Q13485 552 aaKnown RBP14.61□□□□□ -0.07
LINC01543-201ENST00000578367 AAK1Q2M2I8 961 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 LEXMQ3ZCV2 418 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 RARS2Q5T160 578 aaKnown RBP14.61□□□□□ -0.07
LINC01543-201ENST00000578367 PMF1Q6P1K2 205 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 TMC5Q6UXY8 1006 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 BEND5Q7L4P6 421 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 MON1AQ86VX9 555 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 ERICH1Q86X53 443 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 PHF13Q86YI8 300 aaPredicted RBP14.61□□□□□ -0.07
LINC01543-201ENST00000578367 TMTC1Q8IUR5 882 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 SIX6OS1Q8N1H7 587 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 WDTC1Q8N5D0 677 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 C1orf131Q8NDD1 294 aaKnown RBP14.61□□□□□ -0.07
LINC01543-201ENST00000578367 SLC30A5Q8TAD4 765 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 GIPC2Q8TF65 315 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 SLC20A1Q8WUM9 679 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 SUSD6Q92537 303 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 PPP1R13BQ96KQ4 1090 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 CDK5RAP1Q96SZ6 601 aaKnown RBP14.61□□□□□ -0.07
LINC01543-201ENST00000578367 LRRC3Q9BY71 257 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 ARHGAP20Q9P2F6 1191 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 WDR35Q9P2L0 1181 aa14.61□□□□□ -0.07
LINC01543-201ENST00000578367 ZFP37Q9Y6Q3 630 aaPredicted RBP14.61□□□□□ -0.07
LINC01543-201ENST00000578367 NRDCO43847 1150 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 SOAT2O75908 522 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 ZBED1O96006 694 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 CALB1P05937 261 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 RHOP08100 348 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 ZDHHC11BP0C7U3 371 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 MMP8P22894 467 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 GPR15P49685 360 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 TUBP50607 506 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 RBM10P98175 930 aaKnown RBP14.6□□□□□ -0.07
LINC01543-201ENST00000578367 C1QBPQ07021 282 aaKnown RBP14.6□□□□□ -0.07
LINC01543-201ENST00000578367 CCDC85BQ15834 202 aaPredicted RBP14.6□□□□□ -0.07
LINC01543-201ENST00000578367 C10orf76Q5T2E6 689 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 PDZD4Q76G19 769 aaPredicted RBP14.6□□□□□ -0.07
LINC01543-201ENST00000578367 TMC8Q8IU68 726 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 CCDC112Q8NEF3 446 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 TRIM11Q96F44 468 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 PDLIM2Q96JY6 352 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 CCDC42Q96M95 316 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 DEF6Q9H4E7 631 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 ASNSD1Q9NWL6 643 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 CLIC5Q9NZA1 410 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 TRPM5Q9NZQ8 1165 aa14.6□□□□□ -0.07
LINC01543-201ENST00000578367 DNMT3BQ9UBC3 853 aaKnown RBP14.6□□□□□ -0.07
LINC01543-201ENST00000578367 RTN2O75298 545 aa14.59□□□□□ -0.07
LINC01543-201ENST00000578367 CALCAP01258 141 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms