RNA–Protein interactions for RNA: ENST00000578205.5

RHOT1-206, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 2,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-206ENST00000578205 KCNC2Q96PR1 638 aa4.47□□□□□ -1.69
RHOT1-206ENST00000578205 ACO2Q99798 780 aaKnown RBP4.47□□□□□ -1.69
RHOT1-206ENST00000578205 JPH2Q9BR39 696 aaPredicted RBP4.47□□□□□ -1.69
RHOT1-206ENST00000578205 MSTO1Q9BUK6 570 aa4.47□□□□□ -1.69
RHOT1-206ENST00000578205 CLSTN2Q9H4D0 955 aa4.47□□□□□ -1.69
RHOT1-206ENST00000578205 IL23AQ9NPF7 189 aa4.47□□□□□ -1.69
RHOT1-206ENST00000578205 FAM86C1Q9NVL1 165 aa4.47□□□□□ -1.69
RHOT1-206ENST00000578205 PRG3Q9Y2Y8 225 aaPredicted RBP4.47□□□□□ -1.69
RHOT1-206ENST00000578205 VPS13AQ96RL7 3174 aa4.47□□□□□ -1.69
RHOT1-206ENST00000578205 ALPK3Q96L96 1907 aa4.46□□□□□ -1.69
RHOT1-206ENST00000578205 TRIP11Q15643 1979 aa4.46□□□□□ -1.69
RHOT1-206ENST00000578205 A0A1B0GUA9 196 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 FITM1A5D6W6 292 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 CASTOR2A6NHX0 329 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ACKR2O00590 384 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ASAP2O43150 1006 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 TGFB1I1O43294 461 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 B4GALT3O60512 393 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ZC3H11AO75152 810 aaKnown RBP eCLIP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 CA3P07451 260 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 SCNN1GP51170 649 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 WDR5P61964 334 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 RNASELQ05823 741 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 NCBP1Q09161 790 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 PPP2R5AQ15172 486 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ZNF385BQ569K4 471 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 CLEC17AQ6ZS10 378 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 EP400NLQ6ZTU2 488 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 C11orf57Q6ZUT1 292 aaPredicted RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 RPUSD2Q8IZ73 545 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 C18orf25Q96B23 403 aaPredicted RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 MED15Q96RN5 788 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 YME1L1Q96TA2 773 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 FZD8Q9H461 694 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 PDZD7Q9H5P4 517 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 PDE11AQ9HCR9 933 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ALG13Q9NP73 1137 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 TOPORSQ9NS56 1045 aaPredicted RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 TYW1Q9NV66 732 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ARHGAP28Q9P2N2 729 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 DNAJB4Q9UDY4 337 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 IPPQ9Y573 584 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 PCDHB7Q9Y5E2 793 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 COL1A2P08123 1366 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 FAM237AA0A1B0GTK4 181 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 SMAD7O15105 426 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 EXOC3O60645 756 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 SMC2O95347 1197 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 STAG3L1P0CL83 205 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ZNF131P52739 623 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ADAM9Q13443 819 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 TIGD5Q53EQ6 642 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 UBXN11Q5T124 520 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ARMCX5Q6P1M9 558 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 SASS6Q6UVJ0 657 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 DBX2Q6ZNG2 339 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 MRPL41Q8IXM3 137 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 AUTS2Q8WXX7 1259 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ARNTL2Q8WYA1 636 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ZMAT2Q96NC0 199 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 GDF15Q99988 308 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 NTPCRQ9BSD7 190 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 MRPL4Q9BYD3 311 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 CDT1Q9H211 546 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ERVK-5Q9HDB9 667 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 SAMSN1Q9NSI8 373 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 ODF2LQ9ULJ1 636 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 YBX2Q9Y2T7 364 aaKnown RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 TIMM13Q9Y5L4 95 aaPredicted RBP4.46□□□□□ -1.7
RHOT1-206ENST00000578205 FRMPD3Q5JV73 1810 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 TTC3P53804 2025 aa4.46□□□□□ -1.7
RHOT1-206ENST00000578205 TEX51A0A1B0GUA7 166 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 ARL5CA6NH57 179 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 MEFVO15553 781 aaPredicted RBP4.45□□□□□ -1.7
RHOT1-206ENST00000578205 RECQL4O94761 1208 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 STK10O94804 968 aaKnown RBP4.45□□□□□ -1.7
RHOT1-206ENST00000578205 DDHD2O94830 711 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 ITGB1P05556 798 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 KRT19P08727 400 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 TRIM49P0CI25 452 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 TRIM49CP0CI26 452 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 ATF7P17544 494 aaPredicted RBP4.45□□□□□ -1.7
RHOT1-206ENST00000578205 MUTP22033 750 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 NR2F2P24468 414 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 SARSP49591 514 aaKnown RBP4.45□□□□□ -1.7
RHOT1-206ENST00000578205 RGS19P49795 217 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 TFAMQ00059 246 aaKnown RBP4.45□□□□□ -1.7
RHOT1-206ENST00000578205 GTF2BQ00403 316 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 APBA1Q02410 837 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 LRMPQ12912 555 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 PPIGQ13427 754 aaKnown RBP eCLIP4.45□□□□□ -1.75e-7■□□□□ 8.2
RHOT1-206ENST00000578205 BTG3Q14201 252 aaPredicted RBP4.45□□□□□ -1.7
RHOT1-206ENST00000578205 KNOP1Q1ED39 458 aaKnown RBP4.45□□□□□ -1.7
RHOT1-206ENST00000578205 ZSCAN23Q3MJ62 389 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 ANO6Q4KMQ2 910 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 CLLU1OSQ5K130 101 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 NOTUMQ6P988 496 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 ANKS3Q6ZW76 656 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 SLC24A5Q71RS6 500 aa4.45□□□□□ -1.7
RHOT1-206ENST00000578205 SRGAP1Q7Z6B7 1085 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms