RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 POLD4Q9HCU8 107 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 ZNF334Q9HCZ1 680 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 CACNA2D2Q9NY47 1150 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 KCNH3Q9ULD8 1083 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 AP4E1Q9UPM8 1137 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 GDAQ9Y2T3 454 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 PCDHB5Q9Y5E4 795 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 INSL5Q9Y5Q6 135 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 PIAS3Q9Y6X2 628 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 FASNP49327 2511 aaKnown RBP4.34□□□□□ -1.72
PTPRM-206ENST00000578093 ANKRD11Q6UB99 2663 aaPredicted RBP4.34□□□□□ -1.72
PTPRM-206ENST00000578093 GCN1Q92616 2671 aaKnown RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 SCN1AP35498 2009 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 ANAPC1Q9H1A4 1944 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 ADAMTS9Q9P2N4 1935 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 CCDC194A0A1B0GVG4 234 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 ARHGEF37A1IGU5 675 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 SLC38A8A6NNN8 435 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 KRTAP9-7A8MTY7 169 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 TMEM189-UBE2V1I3L0A0 370 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 HYAL3O43820 417 aaPredicted RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 DKC1O60832 514 aaKnown RBP eCLIP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 MED24O75448 989 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 B3GAT3O94766 335 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 LYPLA2O95372 231 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 TIAF1O95411 115 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 CTDNEP1O95476 244 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 TOP3BO95985 862 aaKnown RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 LRG1P02750 347 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 THP07101 528 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 HMGB1P09429 215 aaKnown RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 C1QTNF9P0C862 333 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 ADH5P11766 374 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 GCFC2P16383 781 aaKnown RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 SPINK2P20155 84 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 CCNE1P24864 410 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 PXNP49023 591 aaPredicted RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 CCR3P51677 355 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 ARPP19P56211 112 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 FAM160A1Q05DH4 1040 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 POU5F1BQ06416 359 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 KRTAP1-1Q07627 177 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 SSRP1Q08945 709 aaKnown RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 SCRN1Q12765 414 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 SIM2Q14190 667 aaPredicted RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 PCBP1Q15365 356 aaKnown RBP eCLIP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 TEAD2Q15562 447 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 CSRP2Q16527 193 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 UPP1Q16831 310 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 ZNF394Q53GI3 561 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 NT5DC1Q5TFE4 455 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 TCEAL6Q6IPX3 200 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 SLC8B1Q6J4K2 584 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 PDZD4Q76G19 769 aaPredicted RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 OTUD6AQ7L8S5 288 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 DYMQ7RTS9 669 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 TMC8Q8IU68 726 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 HACE1Q8IYU2 909 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 TTC8Q8TAM2 541 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 SHKBP1Q8TBC3 707 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 GATAD2BQ8WXI9 593 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 FAM3CQ92520 227 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 TCEAL3Q969E4 200 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 GAL3ST3Q96A11 431 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 CHFRQ96EP1 664 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 CHAMP1Q96JM3 812 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 ZFYVE19Q96K21 471 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 ZMAT2Q96NC0 199 aaKnown RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 LRRC3BQ96PB8 259 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 HSD17B14Q9BPX1 270 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 SPON2Q9BUD6 331 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 FAM126AQ9BYI3 521 aaPredicted RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 C22orf23Q9BZE7 217 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 TMEM60Q9H2L4 133 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 FZD8Q9H461 694 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 CCSER2Q9H7U1 834 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 CYP4F11Q9HBI6 524 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 PRMT7Q9NVM4 692 aaPredicted RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 POLR3BQ9NW08 1133 aaPredicted RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 GDE1Q9NZC3 331 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 CEP72Q9P209 647 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 ANGPTL2Q9UKU9 493 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 RAB23Q9ULC3 237 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.33□□□□□ -1.72
PTPRM-206ENST00000578093 HIF3AQ9Y2N7 669 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 BACE2Q9Y5Z0 518 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 THADAQ6YHU6 1953 aa4.33□□□□□ -1.72
PTPRM-206ENST00000578093 SETXQ7Z333 2677 aaKnown RBP4.32□□□□□ -1.72
PTPRM-206ENST00000578093 ASCC3Q8N3C0 2202 aaKnown RBP4.32□□□□□ -1.72
PTPRM-206ENST00000578093 STK36Q9NRP7 1315 aa4.32□□□□□ -1.72
PTPRM-206ENST00000578093 HEPACAM2A8MVW5 462 aa4.32□□□□□ -1.72
PTPRM-206ENST00000578093 PODXLO00592 558 aa4.32□□□□□ -1.72
PTPRM-206ENST00000578093 MAN2B1O00754 1011 aa4.32□□□□□ -1.72
PTPRM-206ENST00000578093 ABLIM1O14639 778 aa4.32□□□□□ -1.72
PTPRM-206ENST00000578093 PRRG1O14668 218 aa4.32□□□□□ -1.72
PTPRM-206ENST00000578093 N4BP3O15049 544 aa4.32□□□□□ -1.72
PTPRM-206ENST00000578093 TMPRSS2O15393 492 aa4.32□□□□□ -1.72
PTPRM-206ENST00000578093 NCAM2O15394 837 aa4.32□□□□□ -1.72
PTPRM-206ENST00000578093 EXTL3O43909 919 aa4.32□□□□□ -1.72
PTPRM-206ENST00000578093 LRP3O75074 770 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms