RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 ZKSCAN1P17029 563 aaPredicted RBP4.38□□□□□ -1.71
TOP2A-203ENST00000577706 HOXB6P17509 224 aaKnown RBP4.38□□□□□ -1.71
TOP2A-203ENST00000577706 TPTEP56180 551 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 TUBA4AP68366 448 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 SLC10A2Q12908 348 aaPredicted RBP4.38□□□□□ -1.71
TOP2A-203ENST00000577706 GRM3Q14832 879 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 CNGA2Q16280 664 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 SRSF7Q16629 238 aaKnown RBP eCLIP4.38□□□□□ -1.71
TOP2A-203ENST00000577706 SLC44A4Q53GD3 710 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 ZNF804AQ7Z570 1209 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 CHSY1Q86X52 802 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 VGLL2Q8N8G2 317 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 ABHD11Q8NFV4 315 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 CYP2W1Q8TAV3 490 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 DNAJB14Q8TBM8 379 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 SPSB4Q96A44 273 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 TRIM43Q96BQ3 446 aaPredicted RBP4.38□□□□□ -1.71
TOP2A-203ENST00000577706 PRR25Q96S07 402 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 SH2D3AQ9BRG2 576 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 QTRT1Q9BXR0 403 aaKnown RBP4.38□□□□□ -1.71
TOP2A-203ENST00000577706 FAM204AQ9H8W3 233 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 COL20A1Q9P218 1284 aa4.38□□□□□ -1.71
TOP2A-203ENST00000577706 VSTM5A8MXK1 200 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 ISM1B1AKI9 464 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 H7C4K7 107 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 FRS3O43559 492 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 EXOC3O60645 756 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 MAP4K4O95819 1239 aaPredicted RBP4.37□□□□□ -1.71
TOP2A-203ENST00000577706 DLDP09622 509 aaKnown RBP4.37□□□□□ -1.71
TOP2A-203ENST00000577706 MYF5P13349 255 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 FPR3P25089 353 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 E2F1Q01094 437 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 CCNIQ14094 377 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 NPY5RQ15761 445 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 KIAA0753Q2KHM9 967 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 CEP78Q5JTW2 689 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 KIAA1614Q5VZ46 1190 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 FCRL6Q6DN72 434 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 TRIM72Q6ZMU5 477 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 CCDC149Q6ZUS6 474 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 CHST15Q7LFX5 561 aaPredicted RBP4.37□□□□□ -1.71
TOP2A-203ENST00000577706 SESTD1Q86VW0 696 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 ANKRD13AQ8IZ07 590 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 SPARTQ8N0X7 666 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 PNLDC1Q8NA58 520 aaKnown RBP4.37□□□□□ -1.71
TOP2A-203ENST00000577706 LRTOMTQ8WZ04 291 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 NMD3Q96D46 503 aaKnown RBP4.37□□□□□ -1.71
TOP2A-203ENST00000577706 ZBTB45Q96K62 511 aaPredicted RBP4.37□□□□□ -1.71
TOP2A-203ENST00000577706 STK31Q9BXU1 1019 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 DNMT3BQ9UBC3 853 aaKnown RBP4.37□□□□□ -1.71
TOP2A-203ENST00000577706 CDY1Q9Y6F8 540 aa4.37□□□□□ -1.71
TOP2A-203ENST00000577706 MBD3L4A6NDZ8 208 aaPredicted RBP4.36□□□□□ -1.71
TOP2A-203ENST00000577706 MBD3L3A6NE82 208 aaPredicted RBP4.36□□□□□ -1.71
TOP2A-203ENST00000577706 TPP1O14773 563 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 PMPCBO75439 489 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 RASSF9O75901 435 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 RASAL1O95294 804 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 PRKCBP05771 671 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 PRR35P0CG20 571 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 PRKAR1BP31321 381 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 ALDH5A1P51649 535 aaPredicted RBP4.36□□□□□ -1.71
TOP2A-203ENST00000577706 ITGA8P53708 1063 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 CACNB3P54284 484 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 BCAT1P54687 386 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 RPS16P62249 146 aaKnown RBP4.36□□□□□ -1.71
TOP2A-203ENST00000577706 SSBP2P81877 361 aaPredicted RBP4.36□□□□□ -1.71
TOP2A-203ENST00000577706 PSG6Q00889 435 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 GALEQ14376 348 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 INSCQ1MX18 579 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 RNASE12Q5GAN4 147 aaKnown RBP4.36□□□□□ -1.71
TOP2A-203ENST00000577706 CACHD1Q5VU97 1274 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 TERB1Q8NA31 727 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 TTC8Q8TAM2 541 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 DAZAP1Q96EP5 407 aaKnown RBP4.36□□□□□ -1.71
TOP2A-203ENST00000577706 APIPQ96GX9 242 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 PPP1R9BQ96SB3 815 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 TRIM5Q9C035 493 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 OBP2AQ9NY56 170 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 LPAR3Q9UBY5 353 aa4.36□□□□□ -1.71
TOP2A-203ENST00000577706 AFF4Q9UHB7 1163 aaKnown RBP4.36□□□□□ -1.71
TOP2A-203ENST00000577706 DRG1Q9Y295 367 aaKnown RBP4.36□□□□□ -1.71
TOP2A-203ENST00000577706 FRMPD2Q68DX3 1309 aaPredicted RBP4.36□□□□□ -1.71
TOP2A-203ENST00000577706 LOC102723971A0A1B0GUV8 181 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 RGS10O43665 173 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 SRGAP2O75044 1071 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 ZBED1O96006 694 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 HRGP04196 525 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 KLRC1P26715 233 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 UQCRC1P31930 480 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 GKP32189 559 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 PTDSS1P48651 473 aaKnown RBP4.35□□□□□ -1.71
TOP2A-203ENST00000577706 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
TOP2A-203ENST00000577706 GFOD2Q3B7J2 385 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 MTX3Q5HYI7 312 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 CERCAMQ5T4B2 595 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 ZNF626Q68DY1 528 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 DARS2Q6PI48 645 aaKnown RBP4.35□□□□□ -1.71
TOP2A-203ENST00000577706 MTHFD1LQ6UB35 978 aa4.35□□□□□ -1.71
TOP2A-203ENST00000577706 KIRREL2Q6UWL6 708 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms