RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TMC7Q7Z402 723 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CCDC112Q8NEF3 446 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SPPL2BQ8TCT7 592 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 HDAC7Q8WUI4 952 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SLC35F5Q8WV83 523 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PCED1BQ96HM7 432 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 B3GALT6Q96L58 329 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TMEM209Q96SK2 561 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CHP1Q99653 195 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 BAG1Q99933 345 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 B3GNT5Q9BYG0 378 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PNPLA8Q9NP80 782 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ACP6Q9NPH0 428 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CYLDQ9NQC7 956 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TMLHEQ9NVH6 421 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 AFF4Q9UHB7 1163 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 R4GN57 208 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ZZEF1O43149 2961 aa11.79□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TEX28O15482 410 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 VNN2O95498 520 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CNPP09543 421 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SKILP12757 684 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ACAT1P24752 427 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 OR1D2P34982 312 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 NRIP1P48552 1158 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ROR1Q01973 937 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 GOLGA8FQ08AF8 430 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 GOLGA8DPQ0D2H9 430 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SLC18A3Q16572 532 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ZC3H14Q6PJT7 736 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PRSS55Q6UWB4 352 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TMEM184AQ6ZMB5 413 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 WDTC1Q8N5D0 677 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 VCPIP1Q96JH7 1222 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 KLHL5Q96PQ7 755 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TCF25Q9BQ70 676 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 EMILIN2Q9BXX0 1053 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 DUSP16Q9BY84 665 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ISCUQ9H1K1 167 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 NHEJ1Q9H9Q4 299 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TSPAN16Q9UKR8 245 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 NR2E1Q9Y466 385 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CDY1Q9Y6F8 540 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 MAST4O15021 2626 aa11.78□□□□□ -0.52
CDK5RAP3-204ENST00000577664 WDR27A2RRH5 827 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 DDX3XO00571 662 aaKnown RBP eCLIP11.77□□□□□ -0.531e-8■■■□□ 15.4
CDK5RAP3-204ENST00000577664 ADAM12O43184 909 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 THAP12O43422 761 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CLSTN1O94985 981 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ADH1AP07327 375 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MMEP08473 750 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SETSIPP0DME0 302 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TNFAIP3P21580 790 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 BRD2P25440 801 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 EIF4A3P38919 411 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ARID5AQ03989 594 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 DMWDQ09019 674 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 KCNC3Q14003 757 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 HS1BP3Q53T59 392 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MDH1BQ5I0G3 518 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 C10orf76Q5T2E6 689 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 RNF19BQ6ZMZ0 732 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TMEM110Q86TL2 294 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 VPS36Q86VN1 386 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TTC30AQ86WT1 665 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TCEAL8Q8IYN2 117 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SCML4Q8N228 414 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SLC2A14Q8TDB8 520 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 KCTD13Q8WZ19 329 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 HSFY1Q96LI6 401 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 C8orf48Q96LL4 319 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CCDC42Q96M95 316 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PCDHB18PQ96TA0 734 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SMOC2Q9H3U7 446 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 IGSF5Q9NSI5 407 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 IL37Q9NZH6 218 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ADAMTS1Q9UHI8 967 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PCDHB5Q9Y5E4 795 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ATP8B3O60423 1300 aa11.77□□□□□ -0.53
CDK5RAP3-204ENST00000577664 DCDC2BA2VCK2 349 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MTMR11A4FU01 709 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 HIDE1A8MVS5 230 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 EIF3CLB5ME19 914 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 XPO1O14980 1071 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ARHGAP6O43182 974 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MICAL2O94851 1124 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PLEKP08567 350 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CFHP08603 1231 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 HAPLN1P10915 354 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CD19P15391 556 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PLA2G4AP47712 749 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 GABRB2P47870 512 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TUFMP49411 452 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CLCN4P51793 760 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 BCAT1P54687 386 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 GSCP56915 257 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PSMC1P62191 440 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 NOMO3P69849 1222 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CCZ1BP86790 482 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CCZ1P86791 482 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms