RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 DCLK1O15075 740 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 ERC2O15083 957 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 AHSGP02765 367 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 ALDH2P05091 517 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 THP07101 528 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 ATXN1LP0C7T5 689 aaKnown RBP3.17□□□□□ -1.9
TOP2A-202ENST00000577541 PF4V1P10720 104 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 PLA2G2AP14555 144 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 CD6P30203 668 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 ALDH9A1P49189 494 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 EPHB1P54762 984 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 WNT3P56703 355 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 SOX8P57073 446 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 RAB1AP62820 205 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 GTF2H3Q13889 308 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 TTF1Q15361 905 aaPredicted RBP3.17□□□□□ -1.9
TOP2A-202ENST00000577541 PCID2Q5JVF3 399 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 VPS53Q5VIR6 699 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 WDR53Q7Z5U6 358 aaPredicted RBP3.17□□□□□ -1.9
TOP2A-202ENST00000577541 PLBD2Q8NHP8 589 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 TNPO1Q92973 898 aaKnown RBP3.17□□□□□ -1.9
TOP2A-202ENST00000577541 MTFMTQ96DP5 389 aaKnown RBP3.17□□□□□ -1.9
TOP2A-202ENST00000577541 CGRRF1Q99675 332 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 PTDSS2Q9BVG9 487 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 RTFDC1Q9BY42 306 aaPredicted RBP3.17□□□□□ -1.9
TOP2A-202ENST00000577541 ACTRT3Q9BYD9 372 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 MLXIPQ9HAP2 919 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 SERHLQ9NQF3 203 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 GABBR1Q9UBS5 961 aa3.17□□□□□ -1.9
TOP2A-202ENST00000577541 M0QYG6 137 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 AKAP10O43572 662 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 TLR5O60602 858 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 OFD1O75665 1012 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 CYP2C9P11712 490 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 HDCP19113 662 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 CYP2C18P33260 490 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 AGFG1P52594 562 aaKnown RBP3.16□□□□□ -1.9
TOP2A-202ENST00000577541 CYP4F2P78329 520 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 EXOSC9Q06265 439 aaKnown RBP3.16□□□□□ -1.9
TOP2A-202ENST00000577541 SRSF1Q07955 248 aaKnown RBP eCLIP3.16□□□□□ -1.9
TOP2A-202ENST00000577541 LONRF3Q496Y0 759 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 MEX3CQ5U5Q3 659 aaKnown RBP3.16□□□□□ -1.9
TOP2A-202ENST00000577541 ICE2Q659A1 982 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 CAPRIN2Q6IMN6 1127 aaKnown RBP3.16□□□□□ -1.9
TOP2A-202ENST00000577541 NAPRTQ6XQN6 538 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 SLC30A10Q6XR72 485 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 NR2C2APQ86WQ0 139 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 CYP2W1Q8TAV3 490 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 KLHDC4Q8TBB5 520 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 KBTBD7Q8WVZ9 684 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 MOGAT1Q96PD6 335 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 TAAR9Q96RI9 348 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 MEIS3Q99687 375 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 MESP1Q9BRJ9 268 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 SARS2Q9NP81 518 aaKnown RBP3.16□□□□□ -1.9
TOP2A-202ENST00000577541 NMRK2Q9NPI5 230 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 AASDHPPTQ9NRN7 309 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 IP6K2Q9UHH9 426 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 GABRQQ9UN88 632 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 SSX2IPQ9Y2D8 614 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 PCDHA1Q9Y5I3 950 aa3.16□□□□□ -1.9
TOP2A-202ENST00000577541 hCG_2014768A0A024R1R8 64 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 A0A087WWL8 130 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 H3BUI4 141 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 SLC16A3O15427 465 aaKnown RBP3.15□□□□□ -1.91
TOP2A-202ENST00000577541 LINC01565O15544 149 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 PLGP00747 810 aaPredicted RBP3.15□□□□□ -1.91
TOP2A-202ENST00000577541 ME1P48163 572 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 ANAPC15P60006 121 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 KRTAP10-3P60369 221 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 GHRHRQ02643 423 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 IQCB1Q15051 598 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 CERKLQ49MI3 558 aaPredicted RBP3.15□□□□□ -1.91
TOP2A-202ENST00000577541 OTUD3Q5T2D3 398 aaPredicted RBP3.15□□□□□ -1.91
TOP2A-202ENST00000577541 TMEM108Q6UXF1 575 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 TRIM72Q6ZMU5 477 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 COLCA1Q6ZS62 124 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 EPM2AIP1Q7L775 607 aaPredicted RBP3.15□□□□□ -1.91
TOP2A-202ENST00000577541 GAS2L3Q86XJ1 694 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 DENND1CQ8IV53 801 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 FAM177A1Q8N128 213 aaPredicted RBP3.15□□□□□ -1.91
TOP2A-202ENST00000577541 SPEM1Q8N4L4 309 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 FAM46DQ8NEK8 389 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 RP9Q8TA86 221 aaKnown RBP3.15□□□□□ -1.91
TOP2A-202ENST00000577541 SLC35G2Q8TBE7 412 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 SLC46A1Q96NT5 459 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 PUS7Q96PZ0 661 aaKnown RBP3.15□□□□□ -1.91
TOP2A-202ENST00000577541 TRIM54Q9BYV2 358 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 SLAMF7Q9NQ25 335 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 PIH1D1Q9NWS0 290 aaKnown RBP3.15□□□□□ -1.91
TOP2A-202ENST00000577541 DLL3Q9NYJ7 618 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 PAXBP1Q9Y5B6 917 aa3.15□□□□□ -1.91
TOP2A-202ENST00000577541 POC1B-GALNT4F8VUJ3 575 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 PPM1DO15297 605 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 FRS3O43559 492 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 VPS4BO75351 444 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 UBXN7O94888 489 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 CAMTA2O94983 1202 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 UNC5CO95185 931 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 IL6RP08887 468 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms