RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 MTCL1Q9Y4B5 1905 aaKnown RBP9.05□□□□□ -0.96
NUP88-211ENST00000575976 FAM170AA1A519 330 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 GRXCR2A6NFK2 248 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 AKR1B15C9JRZ8 316 aaPredicted RBP9.04□□□□□ -0.96
NUP88-211ENST00000575976 MBTPS2O43462 519 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 MFAP3LO75121 409 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 GABBR2O75899 941 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 RHOP08100 348 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 TPM1P09493 284 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 MYL4P12829 197 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 CDC25BP30305 580 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 PRKCIP41743 596 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 PLA2G4AP47712 749 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 RGS7P49802 495 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 MRE11P49959 708 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 SLC5A3P53794 718 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 SLC8A3P57103 927 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 FMO1Q01740 532 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 CDR2Q01850 454 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 KLHL30Q0D2K2 578 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 IFRD2Q12894 506 aaPredicted RBP9.04□□□□□ -0.96
NUP88-211ENST00000575976 GSE1Q14687 1217 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 ARID5BQ14865 1188 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 TAF12Q16514 161 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 MEA1Q16626 185 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 LEXMQ3ZCV2 418 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 ATAT1Q5SQI0 421 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 PMF1Q6P1K2 205 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 DENND5BQ6ZUT9 1274 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 ITIH5Q86UX2 942 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 ZNF677Q86XU0 584 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 TMC8Q8IU68 726 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 FMNL3Q8IVF7 1028 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 DRC7Q8IY82 874 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 SMRP1Q8NCR6 262 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 OR8K1Q8NGG5 319 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 SCAMP5Q8TAC9 235 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.04□□□□□ -0.96
NUP88-211ENST00000575976 SYN2Q92777 582 aaPredicted RBP9.04□□□□□ -0.96
NUP88-211ENST00000575976 MYRFLQ96LU7 910 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 CEP295NLQ96MC4 621 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 PCDHB18PQ96TA0 734 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 AGPAT1Q99943 283 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 SYT11Q9BT88 431 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 KCNH6Q9H252 994 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 LHX5Q9H2C1 402 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 HAUS4Q9H6D7 363 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 PNPLA8Q9NP80 782 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 CYTH4Q9UIA0 394 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 USP15Q9Y4E8 981 aaPredicted RBP9.04□□□□□ -0.96
NUP88-211ENST00000575976 XIRP2A4UGR9 3374 aa9.04□□□□□ -0.96
NUP88-211ENST00000575976 PTPRDP23468 1912 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 PRR33A8MZF0 331 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 PIK3R2O00459 728 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 NRG2O14511 850 aaPredicted RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 MOSPD3O75425 235 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 RTN3O95197 1032 aaPredicted RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 F11P03951 625 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 CYP1A1P04798 512 aaPredicted RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 SERPING1P05155 500 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 LCP1P13796 627 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 GJA1P17302 382 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 TNFAIP3P21580 790 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 YWHAQP27348 245 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 GABRR2P28476 465 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 HNRNPH3P31942 346 aaKnown RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 CDH5P33151 784 aaPredicted RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 CCR2P41597 374 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 MTHFRP42898 656 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 KIF11P52732 1056 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 EPHA5P54756 1037 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 NOMO3P69849 1222 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 TFF2Q03403 129 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 TAF10Q12962 218 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 SMAD4Q13485 552 aaKnown RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 PABPC1LQ4VXU2 614 aaKnown RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 RAB41Q5JT25 222 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 CYP4A22Q5TCH4 519 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 HGSNATQ68CP4 663 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 WDR59Q6PJI9 974 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 PDZD4Q76G19 769 aaPredicted RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 ZNF571Q7Z3V5 609 aaPredicted RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 CNGA4Q8IV77 575 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 TC2NQ8N9U0 490 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 SPC24Q8NBT2 197 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 TMEM35BQ8NCS4 154 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 C1orf131Q8NDD1 294 aaKnown RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 OLIG1Q8TAK6 271 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 STK32AQ8WU08 396 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 KCTD13Q8WZ19 329 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 SUSD6Q92537 303 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 TCEAL4Q96EI5 215 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 TRMT2BQ96GJ1 504 aaKnown RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 HSFY1Q96LI6 401 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 RIPOR3Q96MK2 946 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 DNAJC7Q99615 494 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 TTLL2Q9BWV7 592 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 POMKQ9H5K3 350 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms