RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 BRSK2Q8IWQ3 736 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 MINDY1Q8N5J2 469 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 C1orf127Q8N9H9 656 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 STKLD1Q8NE28 680 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 RAD54LQ92698 747 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 FIZ1Q96SL8 496 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 FAM213AQ9BRX8 229 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 TTLL2Q9BWV7 592 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 CCDC86Q9H6F5 360 aaKnown RBP9.62□□□□□ -0.87
SMG6-218ENST00000575454 CAPN10Q9HC96 672 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 DNAAF2Q9NVR5 837 aaKnown RBP9.62□□□□□ -0.87
SMG6-218ENST00000575454 SEL1LQ9UBV2 794 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 SUSD2Q9UGT4 822 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 CPQQ9Y646 472 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 TICRRQ7Z2Z1 1910 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 E2F8A0AVK6 867 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 EIF4E1BA6NMX2 242 aaKnown RBP9.61□□□□□ -0.87
SMG6-218ENST00000575454 ADAM23O75077 832 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 CAPNS1P04632 268 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 KRT19P08727 400 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 HNRNPLP14866 589 aaKnown RBP eCLIP9.61□□□□□ -0.871e-6■■■■□ 21
SMG6-218ENST00000575454 GNSP15586 552 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 PLCG1P19174 1290 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 GARTP22102 1010 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 ADSSP30520 456 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 DDIT3P35638 169 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 LONP1P36776 959 aaKnown RBP9.61□□□□□ -0.87
SMG6-218ENST00000575454 SLC6A11P48066 632 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 NOP14P78316 857 aaKnown RBP9.61□□□□□ -0.87
SMG6-218ENST00000575454 GAD2Q05329 585 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 ZNF33AQ06730 810 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 SCAPQ12770 1279 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 MCM6Q14566 821 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 GAB4Q2WGN9 574 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 SYCP2LQ5T4T6 812 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 TDRD10Q5VZ19 366 aaKnown RBP9.61□□□□□ -0.87
SMG6-218ENST00000575454 SDE2Q6IQ49 451 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 PDZD3Q86UT5 571 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 ADAMTS14Q8WXS8 1223 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 FOXJ1Q92949 421 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 SLITRK1Q96PX8 696 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 ACCSQ96QU6 501 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 DUSP9Q99956 384 aaKnown RBP9.61□□□□□ -0.87
SMG6-218ENST00000575454 SYT15Q9BQS2 421 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 ZDHHC5Q9C0B5 715 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 RBAKQ9NYW8 714 aaPredicted RBP9.61□□□□□ -0.87
SMG6-218ENST00000575454 CFAP97Q9P2B7 532 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 DEC1Q9P2X7 70 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 APOBEC2Q9Y235 224 aaKnown RBP9.61□□□□□ -0.87
SMG6-218ENST00000575454 PCDHB13Q9Y5F0 798 aa9.61□□□□□ -0.87
SMG6-218ENST00000575454 CELSR3Q9NYQ7 3312 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 TISP43B9A030 160 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 H3BQV1 296 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 OLFM2O95897 454 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 ABL1P00519 1130 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 FAM163BP0C2L3 166 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 TMEM191BP0C7N4 346 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 CD59P13987 128 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 BDNFP23560 247 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 NTSR1P30989 418 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 ZXDBP98169 803 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 CYP27A1Q02318 531 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 SOWAHAQ2M3V2 549 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 WDR45BQ5MNZ6 344 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 CCNI2Q6ZMN8 369 aaPredicted RBP9.6□□□□□ -0.87
SMG6-218ENST00000575454 LIMS2Q7Z4I7 341 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 FRMD1Q8N878 549 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 ZNF513Q8N8E2 541 aaPredicted RBP9.6□□□□□ -0.87
SMG6-218ENST00000575454 PDZD8Q8NEN9 1154 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 LARP4BQ92615 738 aaKnown RBP9.6□□□□□ -0.87
SMG6-218ENST00000575454 MYLPFQ96A32 169 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 ANKRD36BP1Q96IX9 119 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 C8orf48Q96LL4 319 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 RNF38Q9H0F5 515 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 MRPL44Q9H9J2 332 aaKnown RBP9.6□□□□□ -0.87
SMG6-218ENST00000575454 BLOC1S4Q9NUP1 217 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 SMPD4Q9NXE4 827 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 STARD13Q9Y3M8 1113 aa9.6□□□□□ -0.87
SMG6-218ENST00000575454 ATXN2Q99700 1313 aaKnown RBP9.59□□□□□ -0.87
SMG6-218ENST00000575454 KIAA0391O15091 583 aaKnown RBP9.59□□□□□ -0.87
SMG6-218ENST00000575454 HOXC11O43248 304 aaPredicted RBP9.59□□□□□ -0.87
SMG6-218ENST00000575454 SH3BP5O60239 455 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 NDUFS2O75306 463 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 OAS1P00973 400 aaKnown RBP9.59□□□□□ -0.87
SMG6-218ENST00000575454 TNNC2P02585 160 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 MBL2P11226 248 aaPredicted RBP9.59□□□□□ -0.87
SMG6-218ENST00000575454 CHRM1P11229 460 aaPredicted RBP9.59□□□□□ -0.87
SMG6-218ENST00000575454 GAP43P17677 238 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 FAM193AP78312 1265 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 TAF10Q12962 218 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 ALCAMQ13740 583 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 SURF1Q15526 300 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 DUOXA2Q1HG44 320 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 PLEKHG6Q3KR16 790 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 SOWAHCQ53LP3 525 aaPredicted RBP9.59□□□□□ -0.87
SMG6-218ENST00000575454 LY6G5CQ5SRR4 150 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 L1TD1Q5T7N2 865 aaKnown RBP9.59□□□□□ -0.87
SMG6-218ENST00000575454 EMC10Q5UCC4 262 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 C19orf48Q6RUI8 117 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 OSTM1Q86WC4 334 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms