RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 IGFBP6P24592 240 aaPredicted RBP24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 CDC42EP1Q00587 391 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 CCDC142Q17RM4 750 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 SCYL2Q6P3W7 929 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 CCHCR1Q8TD31 782 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 UBQLN1Q9UMX0 589 aaKnown RBP24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 SRRM3A6NNA2 597 aaPredicted RBP24.77■■□□□ 1.56
NPLOC4-217ENST00000574897 PCK1P35558 622 aa24.77■■□□□ 1.56
NPLOC4-217ENST00000574897 CPT1AP50416 773 aa24.77■■□□□ 1.56
NPLOC4-217ENST00000574897 ACAP1Q15027 740 aa24.77■■□□□ 1.56
NPLOC4-217ENST00000574897 ZC3H12AQ5D1E8 599 aaKnown RBP24.77■■□□□ 1.56
NPLOC4-217ENST00000574897 FBXO47Q5MNV8 452 aa24.77■■□□□ 1.56
NPLOC4-217ENST00000574897 SLC4A5Q9BY07 1137 aa24.77■■□□□ 1.56
NPLOC4-217ENST00000574897 ZNF638Q14966 1978 aaKnown RBP24.77■■□□□ 1.56
NPLOC4-217ENST00000574897 BRCA2P51587 3418 aa24.77■■□□□ 1.56
NPLOC4-217ENST00000574897 PIRO00625 290 aa24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 C17orf99Q6UX52 265 aa24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 RELL1Q8IUW5 271 aa24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 PRCCQ92733 491 aaPredicted RBP24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 AP5M1Q9H0R1 490 aa24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 CACNG4Q9UBN1 327 aa24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 RPL22P35268 128 aaKnown RBP24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 IFNAR2P48551 515 aa24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 CORO7P57737 925 aa24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 EIF3EP60228 445 aaKnown RBP24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 SF3A3Q12874 501 aaKnown RBP eCLIP24.76■■□□□ 1.557e-8■■■□□ 18.2
NPLOC4-217ENST00000574897 DPYSL3Q14195 570 aa24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 PRMT1Q99873 361 aaKnown RBP24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 INTS9Q9NV88 658 aaKnown RBP24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 HESX1Q9UBX0 185 aa24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 IPPQ9Y573 584 aa24.76■■□□□ 1.55
NPLOC4-217ENST00000574897 CTGFP29279 349 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 CTCFP49711 727 aaPredicted RBP24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 ADCY1Q08828 1119 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 MORF4L2Q15014 288 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 LRRC14Q15048 493 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 STILQ15468 1287 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 CA9Q16790 459 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 ZC3H18Q86VM9 953 aaKnown RBP24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 FAM71DQ8N9W8 422 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 SMG8Q8ND04 991 aaKnown RBP24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 MGARPQ8TDB4 240 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 FAM172AQ8WUF8 416 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 ADAM33Q9BZ11 813 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 STMN4Q9H169 189 aaPredicted RBP24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 FAM124BQ9H5Z6 455 aaPredicted RBP24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 TCRBV7S3A2A0A539 114 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 C17orf102A2RUQ5 167 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 KPNA7A9QM74 516 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 APOC4-APOC2K7ER74 178 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 PRPSAP2O60256 369 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 ENDOD1O94919 500 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 APOC2P02655 101 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 SLC6A3Q01959 620 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 FSCN1Q16658 493 aaKnown RBP24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 VSTM1Q6UX27 236 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 TMEM110Q86TL2 294 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 CCDC13Q8IYE1 715 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 TTC13Q8NBP0 860 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 SPATA18Q8TC71 538 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 RSAD2Q8WXG1 361 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 CPT1BQ92523 772 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 CENPTQ96BT3 561 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 MLXIPLQ9NP71 852 aa24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 DDX20Q9UHI6 824 aaKnown RBP24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 FARP1Q9Y4F1 1045 aaPredicted RBP24.75■■□□□ 1.55
NPLOC4-217ENST00000574897 MEIS3P2A8K0S8 358 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 MAP3K6O95382 1288 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 RBP3P10745 1247 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 ATXN1P54253 815 aaKnown RBP24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 PURAQ00577 322 aaKnown RBP24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 ANKMY2Q8IV38 441 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 ZBED8Q8IZ13 594 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 LRRN4Q8WUT4 740 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 MAGEB5Q9BZ81 275 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 RSAD1Q9HA92 442 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 NAALADL1Q9UQQ1 740 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 DRD4P21917 467 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 AXLP30530 894 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 C1orf228Q6PIY5 440 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 ZFP42Q96MM3 310 aa24.74■■□□□ 1.55
NPLOC4-217ENST00000574897 GNL1P36915 607 aaPredicted RBP24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 PDIA2Q13087 525 aaKnown RBP24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 MSS51Q4VC12 460 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 TAOK1Q7L7X3 1001 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 TRPV1Q8NER1 839 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 TMEM120BA0PK00 339 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 LCP1P13796 627 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 IL4RP24394 825 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 GCAP28676 217 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 MPP2Q14168 576 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 PCBP1Q15365 356 aaKnown RBP eCLIP24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 SYCP2LQ5T4T6 812 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 UNC93AQ86WB7 457 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 ZNF317Q96PQ6 595 aaPredicted RBP24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 FOXP3Q9BZS1 431 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 SHOC2Q9UQ13 582 aa24.73■■□□□ 1.55
NPLOC4-217ENST00000574897 TCEA3O75764 348 aa24.72■■□□□ 1.55
NPLOC4-217ENST00000574897 SDC4P31431 198 aa24.72■■□□□ 1.55
NPLOC4-217ENST00000574897 RGS2P41220 211 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms