RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 APOC4-APOC2K7ER74 178 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 APOC2P02655 101 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 FGFR1P11362 822 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 DESP17661 470 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 LMO2P25791 158 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 ADORA2BP29275 332 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 SDC4P31431 198 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 SV2CQ496J9 727 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 CCDC14Q49A88 953 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 ZNF618Q5T7W0 954 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 ARHGAP17Q68EM7 881 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 SCYL2Q6P3W7 929 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 FAM228AQ86W67 206 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 ARRDC4Q8NCT1 418 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 TSPAN18Q96SJ8 248 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 MAK16Q9BXY0 300 aaKnown RBP14.71□□□□□ -0.05
VPS33B-208ENST00000574755 B3GNT5Q9BYG0 378 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 FOXP3Q9BZS1 431 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 C10orf88Q9H8K7 445 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 EBAG9O00559 213 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 PAPSS1O43252 624 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-208ENST00000574755 GDF10P55107 478 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 BST2Q10589 180 aaKnown RBP14.7□□□□□ -0.06
VPS33B-208ENST00000574755 SREBF2Q12772 1141 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 MMRN1Q13201 1228 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 MORF4L2Q15014 288 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 MFSD5Q6N075 450 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 CYP4V2Q6ZWL3 525 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-208ENST00000574755 RELL1Q8IUW5 271 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 TRPV1Q8NER1 839 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 STK32AQ8WU08 396 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 FAM172AQ8WUF8 416 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 RSAD2Q8WXG1 361 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 HUS1O60921 280 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 PECAM1P16284 738 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-208ENST00000574755 MAGEA4P43358 317 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 BCAT1P54687 386 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 CXCL17Q6UXB2 119 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 TAOK1Q7L7X3 1001 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 NLRP14Q86W24 1093 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 ZDHHC17Q8IUH5 632 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 CRYBG2Q8N1P7 616 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 ANKRD52Q8NB46 1076 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 MDM1Q8TC05 714 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 SERPINB12Q96P63 405 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 MTG1Q9BT17 334 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-208ENST00000574755 DNAI2Q9GZS0 605 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 FAM107BQ9H098 131 aa14.7□□□□□ -0.06
VPS33B-208ENST00000574755 SRRM3A6NNA2 597 aaPredicted RBP14.69□□□□□ -0.06
VPS33B-208ENST00000574755 DPYSL4O14531 572 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 NDC80O14777 642 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 MCF2LO15068 1137 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 KPNA6O60684 536 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 PGK1P00558 417 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 MMP13P45452 471 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 LILRA4P59901 499 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 EIF3EP60228 445 aaKnown RBP14.69□□□□□ -0.06
VPS33B-208ENST00000574755 MRPS6P82932 125 aaKnown RBP14.69□□□□□ -0.06
VPS33B-208ENST00000574755 KRT81Q14533 505 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 CCDC38Q502W7 563 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 RNASEH2BQ5TBB1 312 aaKnown RBP14.69□□□□□ -0.06
VPS33B-208ENST00000574755 CYP4F22Q6NT55 531 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 ADGRF2Q8IZF7 708 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 MYCBPAPQ8TBZ2 947 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 SPATA18Q8TC71 538 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 ZFP42Q96MM3 310 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 SAYSD1Q9NPB0 183 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 CDY2AQ9Y6F7 541 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 DCAF8L1A6NGE4 600 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 GABBR2O75899 941 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 DPYSL3Q14195 570 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 NBPF20Q3BBV1 942 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 TNFAIP8L3Q5GJ75 292 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 FAM47CQ5HY64 1035 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 MAP7D3Q8IWC1 876 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 SLC2A14Q8TDB8 520 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.69□□□□□ -0.06
VPS33B-208ENST00000574755 KHSRPQ92945 711 aaKnown RBP eCLIP14.69□□□□□ -0.06
VPS33B-208ENST00000574755 TNIP3Q96KP6 325 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 CCT8L2Q96SF2 557 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 GTF2IRD1Q9UHL9 959 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 SHOC2Q9UQ13 582 aa14.69□□□□□ -0.06
VPS33B-208ENST00000574755 GMNCA6NCL1 334 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 PTGESO14684 152 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 TRAPPC3O43617 180 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 ENDOD1O94919 500 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 FAM107AO95990 144 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 RBP3P10745 1247 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 CYBAP13498 195 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 LCP1P13796 627 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 CHN1P15882 459 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 ATP5DP30049 168 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 CTCFP49711 727 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-208ENST00000574755 GJA9P57773 515 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 TFDP2Q14188 446 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 BOLA3Q53S33 107 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 PCGF5Q86SE9 256 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 RSPH3Q86UC2 560 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 ZNF473Q8WTR7 871 aaKnown RBP14.68□□□□□ -0.06
VPS33B-208ENST00000574755 CLEC4CQ8WTT0 213 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms