RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 TRIM49BA6NDI0 452 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 SLC16A3O15427 465 aaKnown RBP20.9■□□□□ 0.94
SCARF1-208ENST00000574545 BEST1O76090 585 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 OAS1P00973 400 aaKnown RBP20.9■□□□□ 0.94
SCARF1-208ENST00000574545 EPB41P11171 864 aaKnown RBP20.9■□□□□ 0.94
SCARF1-208ENST00000574545 TDGF1P13385 188 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 ARSAP15289 507 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 BMP6P22004 513 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 LRRC63Q05C16 580 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 CCINQ13939 588 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 SLC2A14Q8TDB8 520 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 OSCP1Q8WVF1 389 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 SMARCD1Q96GM5 515 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 FAXDC2Q96IV6 333 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 NIF3L1Q9GZT8 377 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 MMRN2Q9H8L6 949 aa20.9■□□□□ 0.94
SCARF1-208ENST00000574545 HOOK1Q9UJC3 728 aaKnown RBP20.9■□□□□ 0.94
SCARF1-208ENST00000574545 EP300Q09472 2414 aaPredicted RBP20.9■□□□□ 0.94
SCARF1-208ENST00000574545 GVINP1Q7Z2Y8 2422 aa20.89■□□□□ 0.94
SCARF1-208ENST00000574545 ATP8B3O60423 1300 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 CILPO75339 1184 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 CLSTN1O94985 981 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 RTN3O95197 1032 aaPredicted RBP20.89■□□□□ 0.93
SCARF1-208ENST00000574545 CCDC130P13994 396 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 YWHAQP27348 245 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 SLC7A9P82251 487 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 CSTF1Q05048 431 aaKnown RBP20.89■□□□□ 0.93
SCARF1-208ENST00000574545 PON2Q15165 354 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 PDGFRLQ15198 375 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 DGKKQ5KSL6 1271 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 SNX30Q5VWJ9 437 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 ZBTB44Q8NCP5 570 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 SCAMP5Q8TAC9 235 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 SH3RF2Q8TEC5 729 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 OVCA2Q8WZ82 227 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 HNRNPABQ99729 332 aaKnown RBP20.89■□□□□ 0.93
SCARF1-208ENST00000574545 TSG101Q99816 390 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 MED10Q9BTT4 135 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 IMPG2Q9BZV3 1241 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 DMAP1Q9NPF5 467 aaPredicted RBP20.89■□□□□ 0.93
SCARF1-208ENST00000574545 RBM12Q9NTZ6 932 aaKnown RBP20.89■□□□□ 0.93
SCARF1-208ENST00000574545 COMMD8Q9NX08 183 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 RAB20Q9NX57 234 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 COQ4Q9Y3A0 265 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 GPR179Q6PRD1 2367 aa20.89■□□□□ 0.93
SCARF1-208ENST00000574545 PPP1R3GB7ZBB8 358 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 KINO60870 393 aaKnown RBP20.88■□□□□ 0.93
SCARF1-208ENST00000574545 AP1G2O75843 785 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 ZDHHC11BP0C7U3 371 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 MXI1P50539 228 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 PDE6CP51160 858 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 SLC5A3P53794 718 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 EML3Q32P44 896 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 CBWD6Q4V339 395 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 CBWD3Q5JTY5 395 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 CBWD5Q5RIA9 395 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 ISM2Q6H9L7 571 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 CC2D1AQ6P1N0 951 aaPredicted RBP20.88■□□□□ 0.93
SCARF1-208ENST00000574545 TSSK4Q6SA08 328 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 FBXL13Q8NEE6 735 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 DHTKD1Q96HY7 919 aaPredicted RBP20.88■□□□□ 0.93
SCARF1-208ENST00000574545 SLITRK1Q96PX8 696 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 NT5C1AQ9BXI3 368 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 LINC00597Q9H2U6 94 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 KRT82Q9NSB4 513 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 WDR87Q6ZQQ6 2873 aa20.88■□□□□ 0.93
SCARF1-208ENST00000574545 OTOGLQ3ZCN5 2332 aa20.87■□□□□ 0.93
SCARF1-208ENST00000574545 TRDMT1O14717 391 aaKnown RBP20.87■□□□□ 0.93
SCARF1-208ENST00000574545 STX10O60499 249 aa20.87■□□□□ 0.93
SCARF1-208ENST00000574545 MORC3Q14149 939 aa20.87■□□□□ 0.93
SCARF1-208ENST00000574545 LRRC32Q14392 662 aa20.87■□□□□ 0.93
SCARF1-208ENST00000574545 TMEM196Q5HYL7 178 aa20.87■□□□□ 0.93
SCARF1-208ENST00000574545 ZC3H14Q6PJT7 736 aaKnown RBP20.87■□□□□ 0.93
SCARF1-208ENST00000574545 SYNPOQ8N3V7 929 aa20.87■□□□□ 0.93
SCARF1-208ENST00000574545 SPEM1Q8N4L4 309 aa20.87■□□□□ 0.93
SCARF1-208ENST00000574545 CYFIP2Q96F07 1278 aa20.87■□□□□ 0.93
SCARF1-208ENST00000574545 ECT2Q9H8V3 914 aa20.87■□□□□ 0.93
SCARF1-208ENST00000574545 FBRSL1Q9HCM7 1045 aaKnown RBP20.87■□□□□ 0.93
SCARF1-208ENST00000574545 FAM49BQ9NUQ9 324 aa20.87■□□□□ 0.93
SCARF1-208ENST00000574545 DUS2Q9NX74 493 aaKnown RBP20.87■□□□□ 0.93
SCARF1-208ENST00000574545 CHORDC1Q9UHD1 332 aaPredicted RBP20.87■□□□□ 0.93
SCARF1-208ENST00000574545 WNT6Q9Y6F9 365 aa20.87■□□□□ 0.93
SCARF1-208ENST00000574545 HHLA1C9JL84 531 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 LEFTY2O00292 366 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 LILRB5O75023 590 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 GJA4P35212 333 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 IFRD2Q12894 506 aaPredicted RBP20.86■□□□□ 0.93
SCARF1-208ENST00000574545 FSTL4Q6MZW2 842 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 FOXR2Q6PJQ5 311 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 Q6ZS52 159 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 CLEC20AQ6ZU45 233 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 KIAA1958Q8N8K9 716 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 PDZD8Q8NEN9 1154 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 TATDN2Q93075 761 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 FBXO32Q969P5 355 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 SLC35C1Q96A29 364 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 DUSP9Q99956 384 aaKnown RBP20.86■□□□□ 0.93
SCARF1-208ENST00000574545 ZSCAN32Q9NX65 697 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 PCDHGA2Q9Y5H1 932 aa20.86■□□□□ 0.93
SCARF1-208ENST00000574545 HELZP42694 1942 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms