RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 C3orf20Q8ND61 904 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 CLEC4CQ8WTT0 213 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 C2orf15Q8WU43 125 aaKnown RBP25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 PIWIL1Q96J94 861 aaKnown RBP25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 SEPT5Q99719 369 aaPredicted RBP25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 RXFP1Q9HBX9 757 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 TLR9Q9NR96 1032 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 FNIP2Q9P278 1114 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 UVRAGQ9P2Y5 699 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 SSX2IPQ9Y2D8 614 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 SCINQ9Y6U3 715 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 CNPP09543 421 aaKnown RBP25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 MAGEA11P43364 429 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 NDUFV1P49821 464 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 GSCP56915 257 aaPredicted RBP25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 SNX16P57768 344 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 GNG11P61952 73 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 CREMQ03060 361 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 UBE3AQ05086 875 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 ZNF268Q14587 947 aaPredicted RBP25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 TCEAL1Q15170 157 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 DDR2Q16832 855 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 SDHAF4Q5VUM1 108 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 CHRDL2Q6WN34 429 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 ZNF461Q8TAF7 563 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 MCRS1Q96EZ8 462 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 UBXN6Q9BZV1 441 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 TRIM7Q9C029 511 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 WDR35Q9P2L0 1181 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 TKTL1P51854 596 aa25.3■■□□□ 1.64
ATPAF1-213ENST00000574428 RAB33AQ14088 237 aa25.3■■□□□ 1.64
ATPAF1-213ENST00000574428 MGAT5BQ3V5L5 792 aa25.3■■□□□ 1.64
ATPAF1-213ENST00000574428 FAM102AQ5T9C2 384 aaPredicted RBP25.3■■□□□ 1.64
ATPAF1-213ENST00000574428 SIX6OS1Q8N1H7 587 aa25.3■■□□□ 1.64
ATPAF1-213ENST00000574428 TPCN2Q8NHX9 752 aa25.3■■□□□ 1.64
ATPAF1-213ENST00000574428 BTBD6Q96KE9 485 aa25.3■■□□□ 1.64
ATPAF1-213ENST00000574428 MRPL47Q9HD33 250 aaKnown RBP25.3■■□□□ 1.64
ATPAF1-213ENST00000574428 AFF4Q9UHB7 1163 aaKnown RBP25.3■■□□□ 1.64
ATPAF1-213ENST00000574428 PATJQ8NI35 1801 aa25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 MTA2O94776 668 aa25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 ABLIM3O94929 683 aa25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 RAB41Q5JT25 222 aa25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 PPP1R15BQ5SWA1 713 aa25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 OLFML1Q6UWY5 402 aa25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 STKLD1Q8NE28 680 aa25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 MCEEQ96PE7 176 aa25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 SELENOOQ9BVL4 669 aa25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 METTL5Q9NRN9 209 aaKnown RBP25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 ANAPC7Q9UJX3 599 aa25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 LAMA3Q16787 3333 aa25.29■■□□□ 1.64
ATPAF1-213ENST00000574428 GRID2IPA4D2P6 1211 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 HIDE1A8MVS5 230 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 TRIM66O15016 1216 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 PALMO75781 387 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 HAPLN1P10915 354 aaPredicted RBP25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 RPL7AP62424 266 aaKnown RBP25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 GPM6BQ13491 265 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 CAMK1Q14012 370 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 SMC1AQ14683 1233 aaKnown RBP25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 TPGS2Q68CL5 300 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 SLC35F6Q8N357 371 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 NDRG1Q92597 394 aaKnown RBP25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 C8orf48Q96LL4 319 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 WDR24Q96S15 920 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 GOLPH3Q9H4A6 298 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 PNPLA8Q9NP80 782 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 BUB1BO60566 1050 aaPredicted RBP25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 SEC24AO95486 1093 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 KRT3P12035 628 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 IRS1P35568 1242 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 HADHBP55084 474 aaKnown RBP25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 SLC6A3Q01959 620 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 TAF5Q15542 800 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 IFI16Q16666 785 aaKnown RBP25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 GPR152Q8TDT2 470 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 MICAL1Q8TDZ2 1067 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 ARNTL2Q8WYA1 636 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 ULBP1Q9BZM6 244 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 SLC28A3Q9HAS3 691 aa25.28■■□□□ 1.64
ATPAF1-213ENST00000574428 C2orf71A6NGG8 1288 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 H3BNC9 293 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 GRAP2O75791 330 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 ATF2P15336 505 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 SLC5A3P53794 718 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 ETF1P62495 437 aaKnown RBP25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 DCUN1D2Q6PH85 259 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 ZDHHC17Q8IUH5 632 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 MRPL43Q8N983 215 aaKnown RBP25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 JOSD2Q8TAC2 188 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 SCAMP5Q8TAC9 235 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 FEZF2Q8TBJ5 459 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 KLHL5Q96PQ7 755 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 ALS2CR12Q96Q35 445 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 IRAK3Q9Y616 596 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 PDE4DIPQ5VU43 2346 aa25.27■■□□□ 1.64
ATPAF1-213ENST00000574428 SIGLEC16A6NMB1 481 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 TMEM110-MUSTN1A8MSY1 372 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 TNFRSF10BO14763 440 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 RNASE9P60153 205 aaKnown RBP25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 IFRD2Q12894 506 aaPredicted RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms