RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 ADORA2BP29275 332 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 IFNAR2P48551 515 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 FNTBP49356 437 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 GALK1P51570 392 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 MLLT6P55198 1093 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-214ENST00000574003 NUCB2P80303 420 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 CCINQ13939 588 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 ZNF528Q3MIS6 628 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 ZC3H14Q6PJT7 736 aaKnown RBP12.03□□□□□ -0.48
RPAIN-214ENST00000574003 KIAA2013Q8IYS2 634 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 ZBTB44Q8NCP5 570 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 SLC2A14Q8TDB8 520 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 ATRIPQ8WXE1 791 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 EZH1Q92800 747 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-214ENST00000574003 NELL1Q92832 810 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 WBP2Q969T9 261 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 ECT2Q9H8V3 914 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 ZMYM5Q9UJ78 669 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 PCDHA5Q9Y5H7 936 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 ZNF292O60281 2723 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 GOLGA6L4A6NEF3 574 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 K7ESF4 209 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 IKBKBO14920 756 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 LILRB5O75023 590 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 KIF20AO95235 890 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 OAS1P00973 400 aaKnown RBP12.02□□□□□ -0.49
RPAIN-214ENST00000574003 KRT13P13646 458 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 GJA4P35212 333 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 PSMC2P35998 433 aaKnown RBP12.02□□□□□ -0.49
RPAIN-214ENST00000574003 CXCL12P48061 93 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 PXNP49023 591 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-214ENST00000574003 SLC5A3P53794 718 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 MAP3K7CLP57077 242 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 NOP14P78316 857 aaKnown RBP12.02□□□□□ -0.49
RPAIN-214ENST00000574003 LRRC32Q14392 662 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 NFIL3Q16649 462 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 EML3Q32P44 896 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 TMEM196Q5HYL7 178 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 INTS8Q75QN2 995 aaKnown RBP12.02□□□□□ -0.49
RPAIN-214ENST00000574003 GPRIN1Q7Z2K8 1008 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 NUP93Q8N1F7 819 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 SPEM1Q8N4L4 309 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 WHAMMQ8TF30 809 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 OSCP1Q8WVF1 389 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 FBXO32Q969P5 355 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 MSANTD3Q96H12 275 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 GMIPQ9P107 970 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 ARHGAP26Q9UNA1 814 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 CPQQ9Y646 472 aa12.02□□□□□ -0.49
RPAIN-214ENST00000574003 SOBPA7XYQ1 873 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 TNFRSF10BO14763 440 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 MAPK13O15264 365 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 MBL2P11226 248 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-214ENST00000574003 RPL13P26373 211 aaKnown RBP12.01□□□□□ -0.49
RPAIN-214ENST00000574003 YWHAQP27348 245 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 CCR3P51677 355 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 PDGFRLQ15198 375 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 ZNF394Q53GI3 561 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 DGKKQ5KSL6 1271 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 ANKRD40Q6AI12 368 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 FILIP1Q7Z7B0 1213 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 SFTPA1Q8IWL2 248 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 TATDN2Q93075 761 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 SMARCD1Q96GM5 515 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 TNIP3Q96KP6 325 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 ARID3AQ99856 593 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 SEMA4AQ9H3S1 761 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 CCSER2Q9H7U1 834 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 TMEM8AQ9HCN3 771 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 CFAP97Q9P2B7 532 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 SMG5Q9UPR3 1016 aaKnown RBP12.01□□□□□ -0.49
RPAIN-214ENST00000574003 PCDHGA2Q9Y5H1 932 aa12.01□□□□□ -0.49
RPAIN-214ENST00000574003 MYO16Q9Y6X6 1858 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 TRDMT1O14717 391 aaKnown RBP12□□□□□ -0.49
RPAIN-214ENST00000574003 COCHO43405 550 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 HRO43593 1189 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 RNF40O75150 1001 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 OLFM2O95897 454 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 IRF1P10914 325 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 P4HA1P13674 534 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 CD44P16070 742 aaKnown RBP12□□□□□ -0.49
RPAIN-214ENST00000574003 SLC7A9P82251 487 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 MESP2Q0VG99 397 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 GRSF1Q12849 480 aaKnown RBP eCLIP12□□□□□ -0.49
RPAIN-214ENST00000574003 GAB4Q2WGN9 574 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 EDRF1Q3B7T1 1238 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 CBWD6Q4V339 395 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 DCAF17Q5H9S7 520 aaPredicted RBP12□□□□□ -0.49
RPAIN-214ENST00000574003 CBWD3Q5JTY5 395 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 CBWD5Q5RIA9 395 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 ZNF658Q5TYW1 1059 aaPredicted RBP12□□□□□ -0.49
RPAIN-214ENST00000574003 PRR23BQ6ZRT6 265 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 CRYBG2Q8N1P7 616 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 CPA6Q8N4T0 437 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 TAF4BQ92750 862 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 SMARCE1Q969G3 411 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 SLITRK1Q96PX8 696 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 P2RY13Q9BPV8 354 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 NIF3L1Q9GZT8 377 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 DMAP1Q9NPF5 467 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms