RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PDGFRAP16234 1089 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 PTAFRP25105 342 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 BSGP35613 385 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 IL15P40933 162 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 MCAMP43121 646 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CPA2P48052 419 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CARSP49589 748 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 ZNF81P51508 661 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 BCAT1P54687 386 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 SESN2P58004 480 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 TGFB2P61812 414 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 MYO1EQ12965 1108 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 SNX1Q13596 522 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 ITGA7Q13683 1181 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 BMPR2Q13873 1038 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 NKG7Q16617 165 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 PRICKLE4Q2TBC4 344 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 SLC44A4Q53GD3 710 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 USP39Q53GS9 565 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 KHDC1LQ5JSQ8 128 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 MPP7Q5T2T1 576 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 RRAGBQ5VZM2 374 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 PPP1R21Q6ZMI0 780 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 LINC00696Q6ZRV3 163 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 UNC13DQ70J99 1090 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 LYSMD3Q7Z3D4 306 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CACNA2D4Q7Z3S7 1137 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CTAGE6Q86UF2 777 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 DNAAF5Q86Y56 855 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 KSR1Q8IVT5 923 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CTAGE4Q8IX94 777 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 FAM217AQ8IXS0 508 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 WDTC1Q8N5D0 677 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 KLHL23Q8NBE8 558 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 OR6J1Q8NGC5 347 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 OR1N1Q8NGS0 311 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 NEDD1Q8NHV4 660 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CCHCR1Q8TD31 782 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 BRIX1Q8TDN6 353 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 HASPINQ8TF76 798 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 PPP1R13LQ8WUF5 828 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 WASF1Q92558 559 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 DPF2Q92785 391 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 WDR89Q96FK6 387 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 FBXL18Q96ME1 805 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 PRAM1Q96QH2 718 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 MCMBPQ9BTE3 642 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 KLF16Q9BXK1 252 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 TRIM54Q9BYV2 358 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 NRSN2Q9GZP1 204 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 LACRTQ9GZZ8 138 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 INTS2Q9H0H0 1204 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 ABCG8Q9H221 673 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 ZFAND3Q9H8U3 227 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 RC3H2Q9HBD1 1191 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CRLF2Q9HC73 371 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 SLC35D1Q9NTN3 355 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 ATAD3AQ9NVI7 634 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 LPAR3Q9UBY5 353 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 ZNF212Q9UDV6 495 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 FAM153AQ9UHL3 310 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CNOT7Q9UIV1 285 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 HCN2Q9UL51 889 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CORO1CQ9ULV4 474 aaPredicted RBP5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 DNAJC16Q9Y2G8 782 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 PCDHA13Q9Y5I0 950 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 CLDN16Q9Y5I7 305 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 WASF2Q9Y6W5 498 aa5.33□□□□□ -1.56
TOPBP1-210ENST00000572787 MROH5Q6ZUA9 1318 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 MYPNQ86TC9 1320 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 GOLGA6L10A0A0M3HER8 536 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 hCG_1809904A0A1W2PP81 198 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 A0A1W2PPE2 198 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 A0A1W2PR64 198 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 VWA3AA6NCI4 1184 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 E7EVH7 732 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 H0Y8X5 98 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 DNM1LO00429 736 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 KCNK3O14649 394 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 SCAMP1O15126 338 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 SPINT1O43278 529 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 SLC25A17O43808 307 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 KRT38O76015 456 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 CD3EP07766 207 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 CCDC172P0C7W6 258 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 BCRP11274 1271 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 GSPT1P15170 499 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 LTKP29376 864 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 GDI1P31150 447 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 ADRA1BP35368 520 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 GMPRP36959 345 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 USP8P40818 1118 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 CASP3P42574 277 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 CENPAP49450 140 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 HARS2P49590 506 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 ARFIP2P53365 341 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 POLGP54098 1239 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 EIF4A1P60842 406 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 PSMC6P62333 389 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 MRPS5P82675 430 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms