RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 JAKMIP2Q96AA8 810 aa10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 E2F7Q96AV8 911 aa10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 TMEM176AQ96HP8 235 aa10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 CEP295NLQ96MC4 621 aa10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 HEXIM2Q96MH2 286 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 LTB4R2Q9NPC1 389 aa10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 DMAP1Q9NPF5 467 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 HPS4Q9NQG7 708 aa10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 SIT1Q9Y3P8 196 aa10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 F5P12259 2224 aa10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 CACNA1IQ9P0X4 2223 aa10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 MYO16Q9Y6X6 1858 aa10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 ATG2BQ96BY7 2078 aa10.85□□□□□ -0.67
GTF3C1-213ENST00000571886 TRAV19A0A0A6YYK7 116 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 H0Y858 1186 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 GALR2O43603 387 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 ARSAP15289 507 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 ACO1P21399 889 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 AVPR1AP37288 418 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 APBA1Q02410 837 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 NHLH1Q02575 133 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 UBXN2BQ14CS0 331 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 ZNF77Q15935 545 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 TXNDC11Q6PKC3 985 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 RRAGAQ7L523 313 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 DTWD2Q8NBA8 298 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 EHBP1Q8NDI1 1231 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 TTC16Q8NEE8 873 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 FBXO32Q969P5 355 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 CHFRQ96EP1 664 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 FAXDC2Q96IV6 333 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 SHDQ96IW2 340 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 CNOT6LQ96LI5 555 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 FAM83CQ9BQN1 747 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 LINC00597Q9H2U6 94 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 TRPV5Q9NQA5 729 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 FAM86C1Q9NVL1 165 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 TRPM5Q9NZQ8 1165 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 GMIPQ9P107 970 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 NDRG2Q9UN36 371 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 ATP8B3O60423 1300 aa10.84□□□□□ -0.67
GTF3C1-213ENST00000571886 MUC6Q6W4X9 2439 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 FAM92AA1XBS5 289 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 SOBPA7XYQ1 873 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 TULP2O00295 520 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 SCAMP3O14828 347 aaKnown RBP10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 RTN3O95197 1032 aaPredicted RBP10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 GNA14O95837 355 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 OLFM2O95897 454 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 OAS1P00973 400 aaKnown RBP10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 AFPP02771 609 aaKnown RBP10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 CKMP06732 381 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 USP17L7P0C7H9 530 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 ZDHHC11BP0C7U3 371 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 FAM200BP0CF97 657 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 RFX1P22670 979 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 NUBP1P53384 320 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 ZNF268Q14587 947 aaPredicted RBP10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 ARHGAP29Q52LW3 1261 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 HSP90AA4PQ58FG1 418 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 NAIF1Q69YI7 327 aaPredicted RBP10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 GJB7Q6PEY0 223 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 TTC30AQ86WT1 665 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 SH3RF2Q8TEC5 729 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 TFAP2BQ92481 460 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 FAM3CQ92520 227 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 WBP2Q969T9 261 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 KREMEN1Q96MU8 473 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 NT5C1BQ96P26 610 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 GBP4Q96PP9 640 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 ZSWIM1Q9BR11 485 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 DUSP16Q9BY84 665 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 EBF3Q9H4W6 596 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 CCSER2Q9H7U1 834 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 NMUR1Q9HB89 426 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 OSER1Q9NX31 292 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 PIAS3Q9Y6X2 628 aa10.83□□□□□ -0.68
GTF3C1-213ENST00000571886 LEFTY2O00292 366 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 P4HA2O15460 535 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 COCHO43405 550 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 FGFR1OPO95684 399 aaKnown RBP10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 TBX18O95935 607 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 CCDC192P0DO97 292 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 SLC9A1P19634 815 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 PLA2G5P39877 138 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 KPNA1P52294 538 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 SLC7A9P82251 487 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 USP4Q13107 963 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 RUNX3Q13761 415 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 MTF1Q14872 753 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 SNX30Q5VWJ9 437 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 ARHGAP17Q68EM7 881 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 ZNF852Q6ZMS4 543 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 RBM43Q6ZSC3 357 aaKnown RBP10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 MAML2Q8IZL2 1156 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 PPM1KQ8N3J5 372 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 UBA3Q8TBC4 463 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 CSGALNACT1Q8TDX6 532 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 NDRG1Q92597 394 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms