RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TCP11X2Q5H9J9 407 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 TPGS2Q68CL5 300 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 LUZP1Q86V48 1076 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 RALGPS2Q86X27 583 aaPredicted RBP14.18□□□□□ -0.14
CCDC40-205ENST00000571028 DHX40Q8IX18 779 aaKnown RBP14.18□□□□□ -0.14
CCDC40-205ENST00000571028 OR6B3Q8NGW1 331 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 TATDN2Q93075 761 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 TMEM209Q96SK2 561 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 MRPL45Q9BRJ2 306 aaKnown RBP14.18□□□□□ -0.14
CCDC40-205ENST00000571028 CRACR2AQ9BSW2 395 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 VPS16Q9H269 839 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 SNX25Q9H3E2 840 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 SMYD3Q9H7B4 428 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 TRPV4Q9HBA0 871 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 APOBEC3GQ9HC16 384 aaKnown RBP14.18□□□□□ -0.14
CCDC40-205ENST00000571028 VPS45Q9NRW7 570 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 GDAP2Q9NXN4 497 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 DSEQ9UL01 958 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 PCDHGA5Q9Y5G8 931 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 DOCK6Q96HP0 2047 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 NRG2O14511 850 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-205ENST00000571028 DPYSL4O14531 572 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 CHADO15335 359 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 ASS1P00966 412 aaKnown RBP14.17□□□□□ -0.14
CCDC40-205ENST00000571028 TPM2P07951 284 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 P4HA1P13674 534 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 GJA1P17302 382 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 EEF1GP26641 437 aaKnown RBP14.17□□□□□ -0.14
CCDC40-205ENST00000571028 CTHP32929 405 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 ZNF252P-AS1Q0IIN9 211 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 TWF1Q12792 350 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 TEAD2Q15562 447 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 MAN2A1Q16706 1144 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 CDKAL1Q5VV42 579 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 DAB2IPQ5VWQ8 1189 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 LRSAM1Q6UWE0 723 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 KBTBD6Q86V97 674 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 OSTM1Q86WC4 334 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 HS6ST3Q8IZP7 471 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 SYNPOQ8N3V7 929 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 TOP6BLQ8N6T0 577 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 KDF1Q8NAX2 398 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-205ENST00000571028 ANKRD20A12PQ8NF67 263 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 TTC8Q8TAM2 541 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 PGLYRP2Q96PD5 576 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 BPIFA3Q9BQP9 254 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 EDEM2Q9BV94 578 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 SMOC1Q9H4F8 434 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 DDX43Q9NXZ2 648 aaKnown RBP14.17□□□□□ -0.14
CCDC40-205ENST00000571028 SLC8A2Q9UPR5 921 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 SCN1AP35498 2009 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 FRYQ5TBA9 3013 aa14.17□□□□□ -0.14
CCDC40-205ENST00000571028 MYBPHLA2RUH7 354 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 GOLGA6L19H0YKK7 550 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 ARNTLO00327 626 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 OAZ2O95190 189 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 SEC24AO95486 1093 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 CYP11A1P05108 521 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 CD58P19256 250 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 GNL1P36915 607 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-205ENST00000571028 PXNP49023 591 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-205ENST00000571028 MCCD1P59942 119 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-205ENST00000571028 ORC1Q13415 861 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 MRPL58Q14197 206 aaKnown RBP14.16□□□□□ -0.14
CCDC40-205ENST00000571028 IQCB1Q15051 598 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 PON2Q15165 354 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 KRT31Q15323 416 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 VWA3BQ502W6 1294 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 RNF214Q8ND24 703 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 OR10T2Q8NGX3 314 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 TAF4BQ92750 862 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 ADAM33Q9BZ11 813 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 NIF3L1Q9GZT8 377 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 INTS2Q9H0H0 1204 aaKnown RBP14.16□□□□□ -0.14
CCDC40-205ENST00000571028 SDCBP2Q9H190 292 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 NDST4Q9H3R1 872 aa14.16□□□□□ -0.14
CCDC40-205ENST00000571028 OR6C75A6NL08 312 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 SOBPA7XYQ1 873 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 A8MXQ7 604 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 ATP2C2O75185 946 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 STAU1O95793 577 aaKnown RBP14.15□□□□□ -0.14
CCDC40-205ENST00000571028 ATP1A3P13637 1013 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 LMO2P25791 158 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 PSMC1P62191 440 aaKnown RBP14.15□□□□□ -0.14
CCDC40-205ENST00000571028 TPM4P67936 248 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 ELF2Q15723 593 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 SLC39A12Q504Y0 691 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 MIIPQ5JXC2 388 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 DPH6Q7L8W6 267 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 TMEM86AQ8N2M4 240 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 EHBP1Q8NDI1 1231 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 KBTBD7Q8WVZ9 684 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 NT5C1BQ96P26 610 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 LPIN3Q9BQK8 851 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 C2orf42Q9NWW7 574 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 GCNT4Q9P109 453 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 CEP72Q9P209 647 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 MAFFQ9ULX9 164 aa14.15□□□□□ -0.14
CCDC40-205ENST00000571028 TICRRQ7Z2Z1 1910 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 CCDC163A0A0D9SF12 145 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms