RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 PCED1BQ96HM7 432 aa20.26■□□□□ 0.83
SCARF1-204ENST00000570902 C8orf48Q96LL4 319 aa20.26■□□□□ 0.83
SCARF1-204ENST00000570902 TMEM121BQ9BXQ6 578 aaPredicted RBP20.26■□□□□ 0.83
SCARF1-204ENST00000570902 BCCIPQ9P287 314 aaKnown RBP eCLIP20.26■□□□□ 0.83
SCARF1-204ENST00000570902 CPQQ9Y646 472 aa20.26■□□□□ 0.83
SCARF1-204ENST00000570902 FAM208BQ5VWN6 2430 aa20.26■□□□□ 0.83
SCARF1-204ENST00000570902 FRMD3A2A2Y4 597 aa20.25■□□□□ 0.83
SCARF1-204ENST00000570902 ZNF233A6NK53 670 aa20.25■□□□□ 0.83
SCARF1-204ENST00000570902 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.25■□□□□ 0.83
SCARF1-204ENST00000570902 PDGFRBP09619 1106 aa20.25■□□□□ 0.83
SCARF1-204ENST00000570902 TIE1P35590 1138 aa20.25■□□□□ 0.83
SCARF1-204ENST00000570902 RESTQ13127 1097 aa20.25■□□□□ 0.83
SCARF1-204ENST00000570902 CCDC73Q6ZRK6 1079 aa20.25■□□□□ 0.83
SCARF1-204ENST00000570902 DEFB124Q8NES8 71 aa20.25■□□□□ 0.83
SCARF1-204ENST00000570902 MMS19Q96T76 1030 aa20.25■□□□□ 0.83
SCARF1-204ENST00000570902 SCNM1Q9BWG6 230 aa20.25■□□□□ 0.83
SCARF1-204ENST00000570902 RNF38Q9H0F5 515 aa20.25■□□□□ 0.83
SCARF1-204ENST00000570902 SRPRBQ9Y5M8 271 aaKnown RBP20.25■□□□□ 0.83
SCARF1-204ENST00000570902 A0A0A0MRY4 1105 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 CD2BP2O95400 341 aaKnown RBP20.24■□□□□ 0.83
SCARF1-204ENST00000570902 ABL1P00519 1130 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 OAS1P00973 400 aaKnown RBP20.24■□□□□ 0.83
SCARF1-204ENST00000570902 HNRNPLP14866 589 aaKnown RBP eCLIP20.24■□□□□ 0.83
SCARF1-204ENST00000570902 GRIA2P42262 883 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 TNFRSF4P43489 277 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 SLC6A11P48066 632 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 TDRD10Q5VZ19 366 aaKnown RBP20.24■□□□□ 0.83
SCARF1-204ENST00000570902 STXBP4Q6ZWJ1 553 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 TMEFF1Q8IYR6 380 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 OR5B17Q8NGF7 314 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 RLN3Q8WXF3 142 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 GATA6Q92908 595 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 SLITRK1Q96PX8 696 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 FNBP1Q96RU3 617 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 ARHGEF4Q9NR80 690 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 PANK4Q9NVE7 773 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 SMPD4Q9NXE4 827 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 CFAP97Q9P2B7 532 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 TBC1D14Q9P2M4 693 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 FBXO2Q9UK22 296 aaPredicted RBP20.24■□□□□ 0.83
SCARF1-204ENST00000570902 CLIC4Q9Y696 253 aa20.24■□□□□ 0.83
SCARF1-204ENST00000570902 ANTXRLA6NF34 631 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 F8VP50 259 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 SGK1O00141 431 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 PRPF6O94906 941 aaKnown RBP20.23■□□□□ 0.83
SCARF1-204ENST00000570902 ADH5P11766 374 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 HOXD12P35452 270 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 GNL1P36915 607 aaPredicted RBP20.23■□□□□ 0.83
SCARF1-204ENST00000570902 TAF10Q12962 218 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 PREPLQ4J6C6 727 aaPredicted RBP20.23■□□□□ 0.83
SCARF1-204ENST00000570902 MDH1BQ5I0G3 518 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 LYSMD4Q5XG99 296 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 RHBDF2Q6PJF5 856 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 HS2ST1Q7LGA3 356 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 WDR49Q8IV35 697 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 FGFBP2Q9BYJ0 223 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 SNX25Q9H3E2 840 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 KIAA1586Q9HCI6 787 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 PTPRJQ12913 1337 aa20.23■□□□□ 0.83
SCARF1-204ENST00000570902 TOP3BO95985 862 aaKnown RBP20.22■□□□□ 0.83
SCARF1-204ENST00000570902 FAM163BP0C2L3 166 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 MBL2P11226 248 aaPredicted RBP20.22■□□□□ 0.83
SCARF1-204ENST00000570902 ENGP17813 658 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 STAT6P42226 847 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 PTGER3P43115 390 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 KIR2DL1P43626 348 aaPredicted RBP20.22■□□□□ 0.83
SCARF1-204ENST00000570902 MAPK8P45983 427 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 MAP7D1Q3KQU3 841 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 SLC23A3Q6PIS1 610 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 ARMCX6Q7L4S7 300 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 TRMT11Q7Z4G4 463 aaKnown RBP20.22■□□□□ 0.83
SCARF1-204ENST00000570902 CCDC65Q8IXS2 484 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 PGBD3Q8N328 593 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 KCNV2Q8TDN2 545 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 HMGB4Q8WW32 186 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 OTUB2Q96DC9 234 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 ELOVL4Q9GZR5 314 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 NEUROG3Q9Y4Z2 214 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 CACNA1GO43497 2377 aa20.22■□□□□ 0.83
SCARF1-204ENST00000570902 PTPRDP23468 1912 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 TCRBV21S2A2A0A5A6 115 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 E2F8A0AVK6 867 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 VPS37CA5D8V6 355 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-204ENST00000570902 UPK3BL1B0FP48 263 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 UPK3BL2E5RIL1 263 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 TACC1O75410 805 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 CHRM1P11229 460 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-204ENST00000570902 ATXN3P54252 364 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-204ENST00000570902 GAD2Q05329 585 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 KDSRQ06136 332 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 PEAR1Q5VY43 1037 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-204ENST00000570902 C12orf40Q86WS4 652 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 CBWD2Q8IUF1 395 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 SFTPA1Q8IWL2 248 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 PDZD8Q8NEN9 1154 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 OR6B3Q8NGW1 331 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 CEP76Q8TAP6 659 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 CLIC6Q96NY7 704 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 BACH2Q9BYV9 841 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms