RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ERV3-1Q14264 604 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 STARD3Q14849 445 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 NCAPHQ15003 741 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 IQCB1Q15051 598 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TAF5Q15542 800 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 QRICH1Q2TAL8 776 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 DPCR1Q3MIW9 517 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 USH1GQ495M9 461 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 CCDC40Q4G0X9 1142 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 ASPRV1Q53RT3 343 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 HSP90AA5PQ58FG0 334 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 FAM209AQ5JX71 171 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 NBPF12Q5TAG4 269 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 C8orf74Q6P047 294 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 PGM2L1Q6PCE3 622 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 DRICH1Q6PGQ1 229 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 MTHFD1LQ6UB35 978 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 B3GNT6Q6ZMB0 384 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TMEM179Q6ZVK1 233 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TMC6Q7Z403 805 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 HOOK3Q86VS8 718 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 P3H2Q8IVL5 708 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 MAML2Q8IZL2 1156 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 CACNA2D3Q8IZS8 1091 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TTC39CQ8N584 583 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TMEM102Q8N9M5 508 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 SLC4A11Q8NBS3 891 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 DAGLBQ8NCG7 672 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 AGBL5Q8NDL9 886 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 GMCL1P1Q8NEA9 526 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 OR56B2PQ8NGI1 322 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 OR8K3Q8NH51 312 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 CEP76Q8TAP6 659 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 ZSCAN18Q8TBC5 510 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 MIPOL1Q8TD10 442 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 KCNG4Q8TDN1 519 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 RAPGEF5Q92565 580 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TBC1D5Q92609 795 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 STAMQ92783 540 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 ATP6V0A1Q93050 837 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 RRP36Q96EU6 259 aaKnown RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 TMEM41AQ96HV5 264 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 VPS50Q96JG6 964 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 ZC3H10Q96K80 434 aaKnown RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 CCDC17Q96LX7 622 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 MTMR9Q96QG7 549 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TCF12Q99081 682 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 GAS2L1Q99501 681 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 PLIN2Q99541 437 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 ACO2Q99798 780 aaKnown RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 FOXP3Q9BZS1 431 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 ZMYND12Q9H0C1 365 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TRPV6Q9H1D0 765 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 SMARCAD1Q9H4L7 1026 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 THAP9Q9H5L6 903 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 SYNCQ9H7C4 482 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 PREBQ9HCU5 417 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 DMRT3Q9NQL9 472 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 GLRX2Q9NS18 164 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 FBXO28Q9NVF7 368 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 SIRT5Q9NXA8 310 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TOR4AQ9NXH8 423 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TAS2R3Q9NYW6 316 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 MARK1Q9P0L2 795 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 COX16Q9P0S2 106 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 NYAP2Q9P242 653 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 USP36Q9P275 1121 aaKnown RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 ADD3Q9UEY8 706 aaKnown RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 HACL1Q9UJ83 578 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 RPS6KA6Q9UK32 745 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 ITGB1BP2Q9UKP3 347 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 LRFN2Q9ULH4 789 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 CNOT6Q9ULM6 557 aaKnown RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 PADI4Q9UM07 663 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 ARHGAP26Q9UNA1 814 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 EXOC7Q9UPT5 735 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TRAV20A0A0B4J274 112 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 LOC100653049A0A140TA62 436 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 CTAGE15A4D2H0 777 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 RGSL1A5PLK6 1076 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 C16orf96A6NNT2 1141 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TMEM232C9JQI7 657 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 GOLGA6L19H0YKK7 550 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 BACH1O14867 736 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ZBTB5O15062 677 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 YKT6O15498 198 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ACTN4O43707 911 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 SLC37A4O43826 429 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SUSD5O60279 629 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 MGEA5O60502 916 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TSPAN1O60635 241 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SMPD2O60906 423 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TRPA1O75762 1119 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 KRT34O76011 436 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 CSPG5O95196 566 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 PGM3O95394 542 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 DLGAP3O95886 979 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 PLGP00747 810 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms