RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 MAP7D1Q3KQU3 841 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 CCDC65Q8IXS2 484 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 THEM5Q8N1Q8 247 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 PDILTQ8N807 584 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 IL17RCQ8NAC3 791 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 MDM1Q8TC05 714 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 HNRNPLLQ8WVV9 542 aaKnown RBP10.85□□□□□ -0.67
RPAP1-212ENST00000569829 HMGB4Q8WW32 186 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 COL26A1Q96A83 441 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 C7orf25Q9BPX7 421 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 NUSAP1Q9BXS6 441 aaKnown RBP10.85□□□□□ -0.67
RPAP1-212ENST00000569829 TRIM9Q9C026 710 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 SLC32A1Q9H598 525 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 TMEM206Q9H813 350 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 DPP3Q9NY33 737 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 EVLQ9UI08 416 aaPredicted RBP10.85□□□□□ -0.67
RPAP1-212ENST00000569829 GTF3C4Q9UKN8 822 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 CFAP45Q9UL16 551 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 PCDHA7Q9UN72 937 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 GTF3C3Q9Y5Q9 886 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 HELZP42694 1942 aaKnown RBP10.85□□□□□ -0.67
RPAP1-212ENST00000569829 PCDH15Q96QU1 1955 aa10.85□□□□□ -0.67
RPAP1-212ENST00000569829 KIAA0391O15091 583 aaKnown RBP10.84□□□□□ -0.67
RPAP1-212ENST00000569829 TRIM24O15164 1050 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 MAP3K13O43283 966 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 ATP2C2O75185 946 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 NOL4O94818 638 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 CYP17A1P05093 508 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 CSH1P0DML2 217 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 CSH2P0DML3 217 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 CD59P13987 128 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 IDEP14735 1019 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 DDX6P26196 483 aaKnown RBP eCLIP10.84□□□□□ -0.67
RPAP1-212ENST00000569829 HOXD13P35453 343 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 WASP42768 502 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 USP46P62068 366 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 EHHADHQ08426 723 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 LMAN2Q12907 356 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 LPCAT2Q7L5N7 544 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 METTL23Q86XA0 190 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 SYT12Q8IV01 421 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 SCN4BQ8IWT1 228 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 PDCL2Q8N4E4 241 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 CXorf38Q8TB03 319 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 ZNF507Q8TCN5 953 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 ATP2A3Q93084 1043 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 PKMYT1Q99640 499 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 TBC1D7Q9P0N9 293 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 PILRBQ9UKJ0 227 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 L1RE1Q9UN81 338 aa10.84□□□□□ -0.67
RPAP1-212ENST00000569829 URB1O60287 2271 aaKnown RBP10.83□□□□□ -0.68
RPAP1-212ENST00000569829 TRAV19A0A0A6YYK7 116 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 TCRBV21S2A2A0A5A6 115 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 KPNA7A9QM74 516 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 LEFTY2O00292 366 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 TNFRSF10BO14763 440 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 EIF3DO15371 548 aaKnown RBP eCLIP10.83□□□□□ -0.68
RPAP1-212ENST00000569829 POLR2DO15514 142 aaKnown RBP10.83□□□□□ -0.68
RPAP1-212ENST00000569829 SH3BP5O60239 455 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 HSP90AA1P07900 732 aaKnown RBP10.83□□□□□ -0.68
RPAP1-212ENST00000569829 USP17L7P0C7H9 530 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 HDCP19113 662 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 KDSRQ06136 332 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 PKP1Q13835 747 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 RESP18Q5W5W9 173 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 LYSMD4Q5XG99 296 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 SLC23A3Q6PIS1 610 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 EPM2AIP1Q7L775 607 aaPredicted RBP10.83□□□□□ -0.68
RPAP1-212ENST00000569829 RAB44Q7Z6P3 723 aaPredicted RBP10.83□□□□□ -0.68
RPAP1-212ENST00000569829 FILIP1Q7Z7B0 1213 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 SLC41A1Q8IVJ1 513 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 DCP1BQ8IZD4 617 aaKnown RBP10.83□□□□□ -0.68
RPAP1-212ENST00000569829 PGBD3Q8N328 593 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 MINDY1Q8N5J2 469 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 C2orf15Q8WU43 125 aaKnown RBP10.83□□□□□ -0.68
RPAP1-212ENST00000569829 CACTINQ8WUQ7 758 aaKnown RBP10.83□□□□□ -0.68
RPAP1-212ENST00000569829 FGFBP2Q9BYJ0 223 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 RNF38Q9H0F5 515 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 MAGEF1Q9HAY2 307 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 SMPD4Q9NXE4 827 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 DDX43Q9NXZ2 648 aaKnown RBP10.83□□□□□ -0.68
RPAP1-212ENST00000569829 BCCIPQ9P287 314 aaKnown RBP eCLIP10.83□□□□□ -0.68
RPAP1-212ENST00000569829 DSEQ9UL01 958 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 HCN2Q9UL51 889 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 RAXQ9Y2V3 346 aa10.83□□□□□ -0.68
RPAP1-212ENST00000569829 GOLGA4Q13439 2230 aaKnown RBP10.82□□□□□ -0.68
RPAP1-212ENST00000569829 PVALEFA0A1B0GWK0 134 aa10.82□□□□□ -0.68
RPAP1-212ENST00000569829 FAM221BA6H8Z2 402 aa10.82□□□□□ -0.68
RPAP1-212ENST00000569829 CYSRT1A8MQ03 144 aa10.82□□□□□ -0.68
RPAP1-212ENST00000569829 PRPF6O94906 941 aaKnown RBP10.82□□□□□ -0.68
RPAP1-212ENST00000569829 PRB1P04280 392 aa10.82□□□□□ -0.68
RPAP1-212ENST00000569829 POLR2BP30876 1174 aaKnown RBP10.82□□□□□ -0.68
RPAP1-212ENST00000569829 KIR2DL1P43626 348 aaPredicted RBP10.82□□□□□ -0.68
RPAP1-212ENST00000569829 SNRPFP62306 86 aaKnown RBP10.82□□□□□ -0.68
RPAP1-212ENST00000569829 SMARCB1Q12824 385 aa10.82□□□□□ -0.68
RPAP1-212ENST00000569829 DHCR24Q15392 516 aa10.82□□□□□ -0.68
RPAP1-212ENST00000569829 INTS6LQ5JSJ4 861 aaKnown RBP10.82□□□□□ -0.68
RPAP1-212ENST00000569829 STXBP4Q6ZWJ1 553 aa10.82□□□□□ -0.68
RPAP1-212ENST00000569829 C11orf74Q86VG3 221 aa10.82□□□□□ -0.68
RPAP1-212ENST00000569829 MIB1Q86YT6 1006 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms