RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SMPD4Q9NXE4 827 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 CGNQ9P2M7 1197 aaKnown RBP14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 GMEB2Q9UKD1 530 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 CFAP45Q9UL16 551 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 USP18Q9UMW8 372 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 R3HCC1Q9Y3T6 440 aaKnown RBP14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 NUP205Q92621 2012 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 FAM237AA0A1B0GTK4 181 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 A8MXQ7 604 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 TRIM66O15016 1216 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 NR3C1P04150 777 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 CYP17A1P05093 508 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 RETP07949 1114 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 ATICP31939 592 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 IFNAR2P48551 515 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 NDUFA8P51970 172 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 IFRD2Q12894 506 aaPredicted RBP14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 BIRC3Q13489 604 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 TRPC3Q13507 836 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 ZNF699Q32M78 642 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 ZACNQ401N2 412 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 FAM35AQ86V20 835 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 C12orf40Q86WS4 652 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 FUKQ8N0W3 1084 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 CPA6Q8N4T0 437 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 ATP2A3Q93084 1043 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 SYAP1Q96A49 352 aaPredicted RBP14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 CEP295NLQ96MC4 621 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 TWNKQ96RR1 684 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 ELOVL4Q9GZR5 314 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 EXOC1Q9NV70 894 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 TRPM5Q9NZQ8 1165 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 CPQQ9Y646 472 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 CHD8Q9HCK8 2581 aa14.73□□□□□ -0.05
GTF3C1-211ENST00000569653 EPG5Q9HCE0 2579 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 GDF9O60383 454 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 BEST1O76090 585 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 CCDC130P13994 396 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 HNRNPLP14866 589 aaKnown RBP eCLIP14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 DRD1P21728 446 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 ANXA13P27216 316 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 ASPAP45381 313 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 LMNB2Q03252 620 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 CCDC6Q16204 474 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 SV2AQ7L0J3 742 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 FILIP1Q7Z7B0 1213 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 ACOT1Q86TX2 421 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 KBTBD6Q86V97 674 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 FSIP1Q8NA03 581 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 RPLP0P6Q8NHW5 317 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 GAB3Q8WWW8 586 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 CD101Q93033 1021 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 SMOQ99835 787 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 APOBEC3GQ9HC16 384 aaKnown RBP14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.72□□□□□ -0.056e-7■■■■■ 104.5
GTF3C1-211ENST00000569653 RXFP3Q9NSD7 469 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 SEMA4GQ9NTN9 838 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 ATP6V1DQ9Y5K8 247 aa14.72□□□□□ -0.05
GTF3C1-211ENST00000569653 ACACBO00763 2458 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 THADAQ6YHU6 1953 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 K7EQS6 105 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 PDXKO00764 312 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 PHACTR2O75167 634 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 RPN1P04843 607 aaKnown RBP14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 TRIM49P0CI25 452 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 TRIM49CP0CI26 452 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 CNR2P34972 360 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 SLC6A11P48066 632 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 DPYDQ12882 1025 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 ZNF667Q5HYK9 610 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 GPRIN1Q7Z2K8 1008 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 GOLGA5Q8TBA6 731 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 SPATA32Q96LK8 384 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 IL37Q9NZH6 218 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 CFAP97Q9P2B7 532 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 RAB23Q9ULC3 237 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 MAPK8IP1Q9UQF2 711 aa14.71□□□□□ -0.05
GTF3C1-211ENST00000569653 TNRC6BQ9UPQ9 1833 aaKnown RBP14.71□□□□□ -0.06
GTF3C1-211ENST00000569653 DCDC2BA2VCK2 349 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 DCLK1O15075 740 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 COCHO43405 550 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 AKAP3O75969 853 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 ABL1P00519 1130 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 ASS1P00966 412 aaKnown RBP14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 HLA-DRAP01903 254 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 ZDHHC11BP0C7U3 371 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 PFKLP17858 780 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 NDST1P52848 882 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 SLC5A3P53794 718 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 PPP3CAQ08209 521 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 PSMD2Q13200 908 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 CSRP2Q16527 193 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 ZCWPW2Q504Y3 356 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 CEP135Q66GS9 1140 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 RHBDF2Q6PJF5 856 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 PRR23CQ6ZRP0 262 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 NUP93Q8N1F7 819 aa14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 GPR161Q8N6U8 529 aaKnown RBP14.7□□□□□ -0.06
GTF3C1-211ENST00000569653 C12orf29Q8N999 325 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms