RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 PABPC1LQ4VXU2 614 aaKnown RBP24.73■■□□□ 1.55
RAB40C-212ENST00000569575 ACAD10Q6JQN1 1059 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 ANKRD54Q6NXT1 300 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 SPATA31D4Q6ZUB0 917 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 LRRC8AQ8IWT6 810 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 WDTC1Q8N5D0 677 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 TTC9BQ8N6N2 239 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 C1orf131Q8NDD1 294 aaKnown RBP24.73■■□□□ 1.55
RAB40C-212ENST00000569575 MYLIPQ8WY64 445 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 TRIM11Q96F44 468 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 PPP1R13BQ96KQ4 1090 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.73■■□□□ 1.55
RAB40C-212ENST00000569575 TRIM62Q9BVG3 475 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 AVENQ9NQS1 362 aaPredicted RBP24.73■■□□□ 1.55
RAB40C-212ENST00000569575 SEPT11Q9NVA2 429 aaKnown RBP24.73■■□□□ 1.55
RAB40C-212ENST00000569575 WDR35Q9P2L0 1181 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 ZMYM5Q9UJ78 669 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 USP3Q9Y6I4 520 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 SOBPA7XYQ1 873 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 IPO7O95373 1038 aaKnown RBP24.72■■□□□ 1.55
RAB40C-212ENST00000569575 CALB1P05937 261 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 PTPN2P17706 415 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 SCNN1AP37088 669 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 PSEN1P49768 467 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 KIF11P52732 1056 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 C1QBPQ07021 282 aaKnown RBP24.72■■□□□ 1.55
RAB40C-212ENST00000569575 PMF1Q6P1K2 205 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 DNAJB7Q7Z6W7 309 aaPredicted RBP24.72■■□□□ 1.55
RAB40C-212ENST00000569575 ARHGAP18Q8N392 663 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 PDZD8Q8NEN9 1154 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 IRGQQ8WZA9 623 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 ISCUQ9H1K1 167 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 TMEM30AQ9NV96 361 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 PATJQ8NI35 1801 aa24.72■■□□□ 1.55
RAB40C-212ENST00000569575 SLC38A8A6NNN8 435 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 DDX3XO00571 662 aaKnown RBP eCLIP24.71■■□□□ 1.552e-7■■■■■ 28.9
RAB40C-212ENST00000569575 LCA5LO95447 670 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 CALCAP01258 141 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 MYBL1P10243 752 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 MMP8P22894 467 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 YWHAQP27348 245 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 SLC5A3P53794 718 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 CACNA2D1P54289 1103 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 GSCP56915 257 aaPredicted RBP24.71■■□□□ 1.55
RAB40C-212ENST00000569575 PM20D1Q6GTS8 502 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 LLGL2Q6P1M3 1020 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 ALKBH5Q6P6C2 394 aaKnown RBP24.71■■□□□ 1.55
RAB40C-212ENST00000569575 Q7L0L9 218 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 SIX6OS1Q8N1H7 587 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 VN1R2Q8NFZ6 395 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 C18orf8Q96DM3 657 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 SLITRK1Q96PX8 696 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 PCDHB18PQ96TA0 734 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 CHP1Q99653 195 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 SYNCQ9H7C4 482 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 NAGPAQ9UK23 515 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 SCML2Q9UQR0 700 aa24.71■■□□□ 1.55
RAB40C-212ENST00000569575 CCDC195A0A1B0GUA6 201 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 GLP2RO95838 553 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 PTMAP06454 111 aaKnown RBP24.7■■□□□ 1.54
RAB40C-212ENST00000569575 CFHP08603 1231 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 EPHA5P54756 1037 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 GOLGA8FQ08AF8 430 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 GOLGA8DPQ0D2H9 430 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 ZNF268Q14587 947 aaPredicted RBP24.7■■□□□ 1.54
RAB40C-212ENST00000569575 NAA35Q5VZE5 725 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 CES5AQ6NT32 575 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 PASD1Q8IV76 773 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 TXLNBQ8N3L3 684 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 ST7Q9NRC1 585 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 TMEM51Q9NW97 253 aa24.7■■□□□ 1.54
RAB40C-212ENST00000569575 GREB1Q4ZG55 1949 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 A0A087X0T9 212 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 ZNF197O14709 1029 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 ARHGAP6O43182 974 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 GLI1P08151 1106 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 PLEKP08567 350 aaPredicted RBP24.69■■□□□ 1.54
RAB40C-212ENST00000569575 FAM228BP0C875 321 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 PFKLP17858 780 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 TKTL1P51854 596 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 SPA17Q15506 151 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 CYP4A22Q5TCH4 519 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 GPR149Q86SP6 731 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 MON1AQ86VX9 555 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 ZNF276Q8N554 614 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 OLIG1Q8TAK6 271 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 ADAM7Q9H2U9 754 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 ASNSD1Q9NWL6 643 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 CLDND1Q9NY35 253 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 INTUQ9ULD6 942 aa24.69■■□□□ 1.54
RAB40C-212ENST00000569575 EPN1Q9Y6I3 576 aaPredicted RBP24.69■■□□□ 1.54
RAB40C-212ENST00000569575 CLUHO75153 1309 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 EIF3CLB5ME19 914 aaKnown RBP24.68■■□□□ 1.54
RAB40C-212ENST00000569575 ZBED1O96006 694 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 HMGA1P17096 107 aaKnown RBP24.68■■□□□ 1.54
RAB40C-212ENST00000569575 CDC25CP30307 473 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 GTF2F1P35269 517 aaKnown RBP eCLIP24.68■■□□□ 1.544e-9■■■■■ 33
RAB40C-212ENST00000569575 TOGARAM2Q6ZUX3 1019 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 BEND5Q7L4P6 421 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 ARCQ7LC44 396 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms