RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 FBXL6Q8N531 539 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 TMEM105Q8N8V8 129 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 SLC4A11Q8NBS3 891 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 EHBP1Q8NDI1 1231 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 USP13Q92995 863 aaPredicted RBP9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 FBXO32Q969P5 355 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 TMEM176AQ96HP8 235 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 C8orf48Q96LL4 319 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 INTS2Q9H0H0 1204 aaKnown RBP9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 TBC1D17Q9HA65 648 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 UBE2TQ9NPD8 197 aaPredicted RBP9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 DMAP1Q9NPF5 467 aaPredicted RBP9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 ARHGEF3Q9NR81 526 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 TAB2Q9NYJ8 693 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 GTSE1Q9NYZ3 720 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 TRPM5Q9NZQ8 1165 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 GMIPQ9P107 970 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 GCNT4Q9P109 453 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 TMEM63CQ9P1W3 806 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 UXTQ9UBK9 157 aaPredicted RBP9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 DACH1Q9UI36 760 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 NUDT5Q9UKK9 219 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 DENND4CQ5VZ89 1909 aa9.56□□□□□ -0.88
GTF3C1-210ENST00000569394 MYO16Q9Y6X6 1858 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 TRAV19A0A0A6YYK7 116 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 RNF225M0QZC1 329 aaPredicted RBP9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 TULP2O00295 520 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 FGF19O95750 216 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 FAM163BP0C2L3 166 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 MBL2P11226 248 aaPredicted RBP9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 NPR3P17342 541 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 HDCP19113 662 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 ACO1P21399 889 aaKnown RBP9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 BRD2P25440 801 aaKnown RBP9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 PGFP49763 221 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 KPNA1P52294 538 aaPredicted RBP9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 INCA1Q0VD86 236 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 CCDC183Q5T5S1 534 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 CLEC20AQ6ZU45 233 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 ALYREFQ86V81 257 aaKnown RBP9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 MON1AQ86VX9 555 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 IRF2BP1Q8IU81 584 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 CRYBG2Q8N1P7 616 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 ZMIZ2Q8NF64 920 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 BPIFB1Q8TDL5 484 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 CSGALNACT1Q8TDX6 532 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 NDRG1Q92597 394 aaKnown RBP9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 NXPE3Q969Y0 559 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 SPATA17Q96L03 361 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 GPR88Q9GZN0 384 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 NACA2Q9H009 215 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 VPS16Q9H269 839 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 ACP6Q9NPH0 428 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 GKN1Q9NS71 199 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 COQ4Q9Y3A0 265 aa9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 MTF2Q9Y483 593 aaPredicted RBP9.55□□□□□ -0.88
GTF3C1-210ENST00000569394 ANAPC1Q9H1A4 1944 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 NUP210Q8TEM1 1887 aaPredicted RBP9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 KCNJ18B7U540 433 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 MDM4O15151 490 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 CYP26A1O43174 497 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 MICAL2O94851 1124 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 MBD3O95983 291 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 ARSAP15289 507 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 AVPR2P30518 371 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 RGS7P49802 495 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 ENPEPQ07075 957 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 KCNJ12Q14500 433 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 MLF2Q15773 248 aaPredicted RBP9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 SGO2Q562F6 1265 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 CWF19L1Q69YN2 538 aaKnown RBP9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 PHLDB3Q6NSJ2 640 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 CC2D1AQ6P1N0 951 aaPredicted RBP9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 MFSD6LQ8IWD5 586 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 LMO3Q8TAP4 145 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 RIN3Q8TB24 985 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 TRMT2BQ96GJ1 504 aaKnown RBP9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 KREMEN1Q96MU8 473 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 SLITRK1Q96PX8 696 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 HNRNPABQ99729 332 aaKnown RBP9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 RNF38Q9H0F5 515 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 EBF3Q9H4W6 596 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 THAP9Q9H5L6 903 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 CCSER2Q9H7U1 834 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 TDP1Q9NUW8 608 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 FAM86C1Q9NVL1 165 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 WNT16Q9UBV4 365 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 TSPAN16Q9UKR8 245 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 NFE2L3Q9Y4A8 694 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 WNT6Q9Y6F9 365 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 MUC6Q6W4X9 2439 aa9.54□□□□□ -0.88
GTF3C1-210ENST00000569394 A0A1W2PQH9 124 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 ZNF840PA6NDX5 716 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 FAM170BA6NMN3 283 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 H0Y858 1186 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 RTN3O95197 1032 aaPredicted RBP9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 TBX18O95935 607 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 HMBSP08397 361 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 USP17L7P0C7H9 530 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 PNMA6AP0CW24 399 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms