RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 AP2B1P63010 937 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 EIF2B5Q13144 721 aaKnown RBP6.66□□□□□ -1.34
UBR1-208ENST00000569066 GLB1LQ6UWU2 654 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 AFG1LQ8WV93 481 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 ATG4AQ8WYN0 398 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 PDP2Q9P2J9 529 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 PGAP2Q9UHJ9 254 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 GJD2Q9UKL4 321 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 PPP6R2O75170 966 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 ANXA6P08133 673 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 CST5P28325 142 aaPredicted RBP6.65□□□□□ -1.34
UBR1-208ENST00000569066 HTR7P34969 479 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 TUBP50607 506 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 FPGSQ05932 587 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 SCAPQ12770 1279 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 TUBB3Q13509 450 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 FBXO47Q5MNV8 452 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 HERC6Q8IVU3 1022 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 SLC44A2Q8IWA5 706 aaPredicted RBP6.65□□□□□ -1.34
UBR1-208ENST00000569066 CCDC117Q8IWD4 279 aaPredicted RBP6.65□□□□□ -1.34
UBR1-208ENST00000569066 TMEM132CQ8N3T6 1108 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 ESX1Q8N693 406 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 METTL25Q8N6Q8 603 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 RNF31Q96EP0 1072 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 TBATAQ96M53 351 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 PYM1Q9BRP8 204 aaKnown RBP6.65□□□□□ -1.34
UBR1-208ENST00000569066 TP63Q9H3D4 680 aaPredicted RBP6.65□□□□□ -1.34
UBR1-208ENST00000569066 KIF17Q9P2E2 1029 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 KCNE5Q9UJ90 142 aa6.65□□□□□ -1.34
UBR1-208ENST00000569066 A0A1W2PS29 197 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 MARCH11A6NNE9 402 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 PAX4O43316 350 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 FAM155BO75949 473 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 UQCRC1P31930 480 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 ADD2P35612 726 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 HNRNPMP52272 730 aaKnown RBP eCLIP6.65□□□□□ -1.35
UBR1-208ENST00000569066 FAM110CQ1W6H9 321 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 RINT1Q6NUQ1 792 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 TOX2Q96NM4 488 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 ADOQ96SZ5 270 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 C17orf80Q9BSJ5 609 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 RIC8AQ9NPQ8 531 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 MAP3K20Q9NYL2 800 aaKnown RBP6.65□□□□□ -1.35
UBR1-208ENST00000569066 RNF181Q9P0P0 153 aa6.65□□□□□ -1.35
UBR1-208ENST00000569066 A0A1B0GVC2 190 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 ZNF623O75123 536 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 RECQL4O94761 1208 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 GLP2RO95838 553 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 RHOP08100 348 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 ZFP36P26651 326 aaKnown RBP6.64□□□□□ -1.35
UBR1-208ENST00000569066 SLC5A2P31639 672 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 RPS7P62081 194 aaKnown RBP6.64□□□□□ -1.35
UBR1-208ENST00000569066 SATB1Q01826 763 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 ATP1A4Q13733 1029 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 CNGB1Q14028 1251 aaPredicted RBP6.64□□□□□ -1.35
UBR1-208ENST00000569066 CERCAMQ5T4B2 595 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 ZNF585AQ6P3V2 769 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 CLEC9AQ6UXN8 241 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 MICALCLQ6ZW33 695 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 KRT73Q86Y46 540 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 FAM109AQ8N4B1 249 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 USP13Q92995 863 aaPredicted RBP6.64□□□□□ -1.35
UBR1-208ENST00000569066 HIST1H2AAQ96QV6 131 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 DDX23Q9BUQ8 820 aaKnown RBP6.64□□□□□ -1.35
UBR1-208ENST00000569066 SAYSD1Q9NPB0 183 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 JAG2Q9Y219 1238 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 FPGT-TNNI3KV9GXZ4 949 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 KIF28PB7ZC32 967 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 RPP40O75818 363 aaKnown RBP6.64□□□□□ -1.35
UBR1-208ENST00000569066 PEPDP12955 493 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 PPIFP30405 207 aaKnown RBP6.64□□□□□ -1.35
UBR1-208ENST00000569066 G3BP1Q13283 466 aaKnown RBP eCLIP6.64□□□□□ -1.35
UBR1-208ENST00000569066 E2F2Q14209 437 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 SLC9A4Q6AI14 798 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 SLC30A5Q8TAD4 765 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 HAPLN3Q96S86 360 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 ALOXE3Q9BYJ1 711 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 TPSD1Q9BZJ3 242 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 TMOD4Q9NZQ9 345 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 RIMKLBQ9ULI2 386 aa6.64□□□□□ -1.35
UBR1-208ENST00000569066 OR2W5A6NFC9 320 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 UNC119BA6NIH7 251 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 PRRT4C9JH25 899 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 H0Y3Z8 333 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 CBFA2T3O75081 653 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 PPP3CBP16298 524 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 RXRAP19793 462 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 GEMIN4P57678 1058 aaKnown RBP6.63□□□□□ -1.35
UBR1-208ENST00000569066 FSTL1Q12841 308 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 CCNIQ14094 377 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 MAATS1Q7Z4T9 603 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 SPPL3Q8TCT6 385 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 DCLRE1CQ96SD1 692 aaKnown RBP6.63□□□□□ -1.35
UBR1-208ENST00000569066 ADAM2Q99965 735 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 ACTRT3Q9BYD9 372 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 VPS16Q9H269 839 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 ZCCHC4Q9H5U6 513 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 ZNF69Q9UC07 566 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 ST6GALNAC2Q9UJ37 374 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms