RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 CCT8P50990 548 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 ZXDBP98169 803 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 NPY5RQ15761 445 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 KIF19Q2TAC6 998 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 SLC10A6Q3KNW5 377 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 INAVAQ3KP66 663 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 TTC22Q5TAA0 569 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 DCAF12L1Q5VU92 463 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 SDHAF4Q5VUM1 108 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 ADGRG2Q8IZP9 1017 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 C1orf216Q8TAB5 229 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 KCNV2Q8TDN2 545 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 C2orf15Q8WU43 125 aaKnown RBP12.11□□□□□ -0.47
CDH3-208ENST00000569036 TOE1Q96GM8 510 aaKnown RBP12.11□□□□□ -0.47
CDH3-208ENST00000569036 MRGPRX1Q96LB2 322 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 ACO2Q99798 780 aaKnown RBP12.11□□□□□ -0.47
CDH3-208ENST00000569036 GPR174Q9BXC1 333 aa12.11□□□□□ -0.47
CDH3-208ENST00000569036 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
CDH3-208ENST00000569036 LSG1Q9H089 658 aaKnown RBP12.11□□□□□ -0.47
CDH3-208ENST00000569036 UXTQ9UBK9 157 aaPredicted RBP12.11□□□□□ -0.47
CDH3-208ENST00000569036 E2F8A0AVK6 867 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 TBC1D3BA6NDS4 549 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.1□□□□□ -0.47
CDH3-208ENST00000569036 ABLIM1O14639 778 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 PPEF2O14830 753 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 RRP9O43818 475 aaKnown RBP12.1□□□□□ -0.47
CDH3-208ENST00000569036 C1SP09871 688 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 MCF2P10911 925 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 CDK4P11802 303 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 ACADVLP49748 655 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 ATP2C1P98194 919 aaPredicted RBP12.1□□□□□ -0.47
CDH3-208ENST00000569036 SPAG1Q07617 926 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 DNAJC3Q13217 504 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 KCNB1Q14721 858 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 PPP2R5AQ15172 486 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 NTRK3Q16288 839 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 RHBDF2Q6PJF5 856 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 KIAA1324Q6UXG2 1013 aaKnown RBP12.1□□□□□ -0.47
CDH3-208ENST00000569036 LRRTM3Q86VH5 581 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 DHX40Q8IX18 779 aaKnown RBP12.1□□□□□ -0.47
CDH3-208ENST00000569036 EXD3Q8N9H8 876 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 CADM4Q8NFZ8 388 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 TRMT2BQ96GJ1 504 aaKnown RBP12.1□□□□□ -0.47
CDH3-208ENST00000569036 SENP8Q96LD8 212 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDH3-208ENST00000569036 TTC12Q9H892 705 aaPredicted RBP12.1□□□□□ -0.47
CDH3-208ENST00000569036 WSB2Q9NYS7 404 aaPredicted RBP12.1□□□□□ -0.47
CDH3-208ENST00000569036 EIF2B4Q9UI10 523 aaKnown RBP12.1□□□□□ -0.47
CDH3-208ENST00000569036 SLCO1B1Q9Y6L6 691 aa12.1□□□□□ -0.47
CDH3-208ENST00000569036 CLEC18AA5D8T8 446 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 H0Y8X5 98 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 LEFTY2O00292 366 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 KCNK3O14649 394 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 SCAMP3O14828 347 aaKnown RBP12.09□□□□□ -0.47
CDH3-208ENST00000569036 KLK10O43240 276 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 SUV39H1O43463 412 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 CCNT1O60563 726 aaKnown RBP12.09□□□□□ -0.47
CDH3-208ENST00000569036 NOL4O94818 638 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 ADH1CP00326 375 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 ADH5P11766 374 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 HARSP12081 509 aaKnown RBP12.09□□□□□ -0.47
CDH3-208ENST00000569036 XRCC6P12956 609 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDH3-208ENST00000569036 PROZP22891 400 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 AFF3P51826 1226 aaKnown RBP12.09□□□□□ -0.47
CDH3-208ENST00000569036 GUCY2FP51841 1108 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 IL9RQ01113 521 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 SEZ6Q53EL9 994 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 C10orf76Q5T2E6 689 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 EGFLAMQ63HQ2 1017 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 CLEC18BQ6UXF7 455 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 DHX32Q7L7V1 743 aaKnown RBP12.09□□□□□ -0.47
CDH3-208ENST00000569036 NEK8Q86SG6 692 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 SKAP1Q86WV1 359 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 HSCBQ8IWL3 235 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 SLFN12Q8IYM2 578 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 CLEC18CQ8NCF0 446 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 KCNE4Q8WWG9 221 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 IGSF8Q969P0 613 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 MYRFLQ96LU7 910 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 PSMG3-AS1Q96PY0 264 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 ACOX2Q99424 681 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 MAN2B2Q9Y2E5 1009 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 ICE1Q9Y2F5 2266 aa12.09□□□□□ -0.47
CDH3-208ENST00000569036 NBASA2RRP1 2371 aa12.08□□□□□ -0.47
CDH3-208ENST00000569036 CENPEQ02224 2701 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 ANO9A1A5B4 782 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 METTL12A8MUP2 240 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 K7ERI5 159 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 PAPSS1O43252 624 aaPredicted RBP12.08□□□□□ -0.48
CDH3-208ENST00000569036 CYP11A1P05108 521 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 HDCP19113 662 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 GLDCP23378 1020 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 LILRA4P59901 499 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 SMARCB1Q12824 385 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 HIST2H2BCQ6DN03 193 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 MPZL3Q6UWV2 235 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 CNDP2Q96KP4 475 aaKnown RBP12.08□□□□□ -0.48
CDH3-208ENST00000569036 ZNF578Q96N58 590 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms