RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 EXOC7Q9UPT5 735 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 CPQQ9Y646 472 aa12.62□□□□□ -0.39
GTF3C1-209ENST00000568569 ANK1P16157 1881 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 ITPR1Q14643 2758 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 KIAA1549LQ6ZVL6 1849 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 A0A0A0MRY4 1105 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 ZNF840PA6NDX5 716 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 ADAM23O75077 832 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 OLFM2O95897 454 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 SERPINF2P08697 491 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 KRT19P08727 400 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 ADH5P11766 374 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 ANXA13P27216 316 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 TNFRSF4P43489 277 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 SLC6A11P48066 632 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 USP46P62068 366 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 PSMC1P62191 440 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 RBP5P82980 135 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 RPL6Q02878 288 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 MAPRE1Q15691 268 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 SOWAHAQ2M3V2 549 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 EMC10Q5UCC4 262 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 SLC36A4Q6YBV0 504 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 DPH6Q7L8W6 267 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 RAB44Q7Z6P3 723 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 C12orf40Q86WS4 652 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 SFR1Q86XK3 245 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 MINDY1Q8N5J2 469 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 CXorf38Q8TB03 319 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 SAAL1Q96ER3 474 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 SYT15Q9BQS2 421 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 TTLL2Q9BWV7 592 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 FSCN3Q9NQT6 498 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 SMPD4Q9NXE4 827 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 CDH9Q9ULB4 789 aa12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 R3HCC1Q9Y3T6 440 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-209ENST00000568569 MYO16Q9Y6X6 1858 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 SCAMP3O14828 347 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 TRIM66O15016 1216 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 ATP2C2O75185 946 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 LDHAP00338 332 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 CAPNS1P04632 268 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 TMEM191BP0C7N4 346 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 BDNFP23560 247 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 FAM193AP78312 1265 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 NOP14P78316 857 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 CYP27A1Q02318 531 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 KDSRQ06136 332 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 MYO1EQ12965 1108 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 PREPLQ4J6C6 727 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 RHBDF2Q6PJF5 856 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 TRMT11Q7Z4G4 463 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 DDX42Q86XP3 938 aaKnown RBP eCLIP12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 KCNV2Q8TDN2 545 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 MTMR12Q9C0I1 747 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 RNF38Q9H0F5 515 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 MRPL44Q9H9J2 332 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 ZDHHC4Q9NPG8 344 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 CFAP97Q9P2B7 532 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 TBC1D14Q9P2M4 693 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 SEL1LQ9UBV2 794 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 SIX4Q9UIU6 781 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 GPSM3Q9Y4H4 160 aa12.6□□□□□ -0.39
GTF3C1-209ENST00000568569 TBC1D3BA6NDS4 549 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 H3BQV1 296 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 ARHGAP33O14559 1287 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 BMP15O95972 392 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 ABL1P00519 1130 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 OAS1P00973 400 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 SYPP08247 313 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 GARTP22102 1010 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 LMO2P25791 158 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 DDIT3P35638 169 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 LONP1P36776 959 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 ZNF33AQ06730 810 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 KCNA1Q09470 495 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 SCARA3Q6AZY7 606 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 ZSWIM2Q8NEG5 633 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 KBTBD7Q8WVZ9 684 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 PCED1BQ96HM7 432 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 FAM84AQ96KN4 292 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 SLITRK1Q96PX8 696 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 ACCSQ96QU6 501 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 STRA6Q9BX79 667 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 CRTAC1Q9NQ79 661 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 DNAAF2Q9NVR5 837 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 CALCOCO1Q9P1Z2 691 aa12.59□□□□□ -0.39
GTF3C1-209ENST00000568569 TCHHQ07283 1943 aa12.58□□□□□ -0.39
GTF3C1-209ENST00000568569 PI4KAP42356 2102 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 E2F8A0AVK6 867 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 F8VP50 259 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 ZBTB24O43167 697 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 GCNT3O95395 438 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 SEC24BO95487 1268 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 MBL2P11226 248 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 CD59P13987 128 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 HOXB2P14652 356 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 GABRG2P18507 467 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 GAD2Q05329 585 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms