RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 CNTN3Q9P232 1028 aa12.71□□□□□ -0.38
TMEM170A-205ENST00000568559 TSR3Q9UJK0 312 aaKnown RBP12.71□□□□□ -0.38
TMEM170A-205ENST00000568559 NDC80O14777 642 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 PSTPIP1O43586 416 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 VSNL1P62760 191 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 BOLA3Q53S33 107 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 PIGZQ86VD9 579 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 FAM131BQ86XD5 332 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 RIN2Q8WYP3 895 aaPredicted RBP12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 KRT35Q92764 455 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 ERLEC1Q96DZ1 483 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 FMO2Q99518 471 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 SMYD2Q9NRG4 433 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 HMGXB4Q9UGU5 601 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 O00370 1275 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 IRX4P78413 519 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 MXRA7P84157 204 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 CEP85LQ5SZL2 805 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 ARHGEF18Q6ZSZ5 1173 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 BZW1Q7L1Q6 419 aaKnown RBP12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 LRRN4CLQ8ND94 238 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 EDEM1Q92611 657 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 CDH9Q9ULB4 789 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 USP18Q9UMW8 372 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 H3BRJ5 948 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 APOEP02649 317 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 URODP06132 367 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 LMO2P25791 158 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 SLC6A3Q01959 620 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 PTPN20Q4JDL3 420 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 DAB2IPQ5VWQ8 1189 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 TRIM51Q9BSJ1 452 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 DPEP3Q9H4B8 488 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 DMAP1Q9NPF5 467 aaPredicted RBP12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 PCDHB5Q9Y5E4 795 aa12.7□□□□□ -0.38
TMEM170A-205ENST00000568559 BTNL10A8MVZ5 291 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 APOL1O14791 398 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 EOMESO95936 686 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 NPR3P17342 541 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 MMP8P22894 467 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 CUL1Q13616 776 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 TRIM60Q495X7 471 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 LRRC31Q6UY01 552 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 PALM2Q8IXS6 379 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 ELMOD1Q8N336 334 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 TMEM130Q8N3G9 435 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 THOC1Q96FV9 657 aaKnown RBP12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 SLITRK1Q96PX8 696 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 DICER1Q9UPY3 1922 aaKnown RBP12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 NCANO14594 1321 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 RAD51CO43502 376 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 PHF2O75151 1096 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 CAND2O75155 1236 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 ALDH1A3P47895 512 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 YWHAZP63104 245 aaKnown RBP12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 SARNPP82979 210 aaKnown RBP12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 SOWAHAQ2M3V2 549 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 OTOP2Q7RTS6 562 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 ATL2Q8NHH9 583 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 CCHCR1Q8TD31 782 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 APBB2Q92870 758 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 CPXM1Q96SM3 734 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 SAGE1Q9NXZ1 904 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 FBXO21O94952 628 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 PYGMP11217 842 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 EIF3EP60228 445 aaKnown RBP12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 LCLAT1Q6UWP7 414 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 FAM183BPQ6ZVS7 135 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 TMC7Q7Z402 723 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 TTC30BQ8N4P2 665 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 TWNKQ96RR1 684 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 ULBP1Q9BZM6 244 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 TRIM7Q9C029 511 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 PCDHB12Q9Y5F1 795 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 BRCA1P38398 1863 aaKnown RBP12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 SF3B1O75533 1304 aaKnown RBP eCLIP12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 TYW5A2RUC4 315 aaKnown RBP12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 GOLGA6CA6NDK9 693 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 SIGLEC16A6NMB1 481 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 SCAMP3O14828 347 aaKnown RBP12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 USP17L7P0C7H9 530 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 GOLGA6DP0CG33 693 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 TPI1P60174 286 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 C15orf39Q6ZRI6 1047 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 CCDC91Q7Z6B0 441 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 ATG4AQ8WYN0 398 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 TSNARE1Q96NA8 513 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 GOLGA6AQ9NYA3 693 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 STXBP5LQ9Y2K9 1186 aa12.69□□□□□ -0.38
TMEM170A-205ENST00000568559 KRT14P02533 472 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 CFHP08603 1231 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 HOXD8P13378 290 aaPredicted RBP12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 KCNE1P15382 129 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 CTCFP49711 727 aaPredicted RBP12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 DHX34Q14147 1143 aaKnown RBP12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 TTC30AQ86WT1 665 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 DEFB106AQ8N104 65 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 SMG8Q8ND04 991 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms