RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 WDR35Q9P2L0 1181 aa10.9□□□□□ -0.66
CDH11-214ENST00000568340 HSFX1Q9UBD0 423 aa10.9□□□□□ -0.66
CDH11-214ENST00000568340 HESX1Q9UBX0 185 aa10.9□□□□□ -0.66
CDH11-214ENST00000568340 STRIP2Q9ULQ0 834 aa10.9□□□□□ -0.66
CDH11-214ENST00000568340 PCDHA11Q9Y5I1 949 aa10.9□□□□□ -0.66
CDH11-214ENST00000568340 LAMA3Q16787 3333 aa10.9□□□□□ -0.66
CDH11-214ENST00000568340 LAMA2P24043 3122 aaKnown RBP10.9□□□□□ -0.66
CDH11-214ENST00000568340 TRIOBPQ9H2D6 2365 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 KIF5CO60282 957 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 SEC24AO95486 1093 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 URODP06132 367 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 HAPLN1P10915 354 aaPredicted RBP10.89□□□□□ -0.67
CDH11-214ENST00000568340 TNNT1P13805 278 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 MAN1A1P33908 653 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 CTNNB1P35222 781 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 RFC1P35251 1148 aaPredicted RBP10.89□□□□□ -0.67
CDH11-214ENST00000568340 PGFP49763 221 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 NDUFV1P49821 464 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 DAOAP59103 153 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 ERVFC1P60507 584 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 GNG11P61952 73 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 UBE3AQ05086 875 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 ADIGQ0VDE8 80 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 SMARCB1Q12824 385 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 ZNF569Q5MCW4 686 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 MEI1Q5TIA1 1274 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 LIN9Q5TKA1 542 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 PAPD7Q5XG87 772 aaKnown RBP10.89□□□□□ -0.67
CDH11-214ENST00000568340 DNAJC24Q6P3W2 148 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 LILRA6Q6PI73 481 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 C4orf50Q6ZRC1 276 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 CYP4V2Q6ZWL3 525 aaPredicted RBP10.89□□□□□ -0.67
CDH11-214ENST00000568340 ZDHHC17Q8IUH5 632 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 FEZF2Q8TBJ5 459 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 SPPL2BQ8TCT7 592 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 IPO4Q8TEX9 1081 aaKnown RBP10.89□□□□□ -0.67
CDH11-214ENST00000568340 C2orf15Q8WU43 125 aaKnown RBP10.89□□□□□ -0.67
CDH11-214ENST00000568340 HES6Q96HZ4 224 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 CALR3Q96L12 384 aaKnown RBP10.89□□□□□ -0.67
CDH11-214ENST00000568340 SLC2A13Q96QE2 648 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 PDCL3Q9H2J4 239 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 PARVAQ9NVD7 372 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 STK39Q9UEW8 545 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 AFF4Q9UHB7 1163 aaKnown RBP10.89□□□□□ -0.67
CDH11-214ENST00000568340 RWDD3Q9Y3V2 267 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 PCDHB12Q9Y5F1 795 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 SCINQ9Y6U3 715 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 SZT2Q5T011 3432 aa10.89□□□□□ -0.67
CDH11-214ENST00000568340 GREB1Q4ZG55 1949 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 EPOPA6NHQ4 379 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 KIF2AO00139 706 aaPredicted RBP10.88□□□□□ -0.67
CDH11-214ENST00000568340 PIK3R2O00459 728 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 GRM6O15303 877 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 TEX28O15482 410 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 DDX3YO15523 660 aaKnown RBP10.88□□□□□ -0.67
CDH11-214ENST00000568340 PROSCO94903 275 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 TUBB4AP04350 444 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 ATP1A1P05023 1023 aaKnown RBP10.88□□□□□ -0.67
CDH11-214ENST00000568340 RB1P06400 928 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 CNPP09543 421 aaKnown RBP10.88□□□□□ -0.67
CDH11-214ENST00000568340 TCF4P15884 667 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 OR1D2P34982 312 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 IRS1P35568 1242 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 ACADSBP45954 432 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 MARCKSL1P49006 195 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 SLC5A3P53794 718 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 USP46P62068 366 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 SLC6A3Q01959 620 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 EIF4EBP2Q13542 120 aaPredicted RBP10.88□□□□□ -0.67
CDH11-214ENST00000568340 SPOUT1Q5T280 376 aaKnown RBP10.88□□□□□ -0.67
CDH11-214ENST00000568340 DCAF12L1Q5VU92 463 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 HFE2Q6ZVN8 426 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 SPATA2LQ8IUW3 424 aaPredicted RBP10.88□□□□□ -0.67
CDH11-214ENST00000568340 EMC1Q8N766 993 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 NDRG1Q92597 394 aaKnown RBP10.88□□□□□ -0.67
CDH11-214ENST00000568340 NT5C3BQ969T7 300 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 SPATA17Q96L03 361 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 PGLYRP2Q96PD5 576 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 MCEEQ96PE7 176 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 ZBED2Q9BTP6 218 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 TTLL2Q9BWV7 592 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 ULBP1Q9BZM6 244 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 DNAI2Q9GZS0 605 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 L2HGDHQ9H9P8 463 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 CNGB3Q9NQW8 809 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 METTL5Q9NRN9 209 aaKnown RBP10.88□□□□□ -0.67
CDH11-214ENST00000568340 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDH11-214ENST00000568340 ASNSD1Q9NWL6 643 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 ABI2Q9NYB9 513 aaPredicted RBP10.88□□□□□ -0.67
CDH11-214ENST00000568340 CALCOCO1Q9P1Z2 691 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 CTTNBP2NLQ9P2B4 639 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 DNAI1Q9UI46 699 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 ANAPC7Q9UJX3 599 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 PCDHB5Q9Y5E4 795 aa10.88□□□□□ -0.67
CDH11-214ENST00000568340 CEP290O15078 2479 aa10.87□□□□□ -0.67
CDH11-214ENST00000568340 C2orf71A6NGG8 1288 aa10.87□□□□□ -0.67
CDH11-214ENST00000568340 YJEFN3A6XGL0 299 aa10.87□□□□□ -0.67
CDH11-214ENST00000568340 HIDE1A8MVS5 230 aa10.87□□□□□ -0.67
CDH11-214ENST00000568340 E7ENQ6 273 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms