RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 ZFYVE26Q68DK2 2539 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 ANTXRLA6NF34 631 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 K7EQS6 105 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 LEFTY2O00292 366 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 SLC9A3R1O14745 358 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-223ENST00000568301 STX6O43752 255 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 PPP6R2O75170 966 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 OLFM2O95897 454 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 TOP3BO95985 862 aaKnown RBP16.04■□□□□ 0.16
COMMD4-223ENST00000568301 TNNI1P19237 187 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 GBP1P32455 592 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 OPRD1P41143 372 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 DGKEP52429 567 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 FOXC1Q12948 553 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 SH3PXD2AQ5TCZ1 1133 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 IQUBQ8NA54 791 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 USP33Q8TEY7 942 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 FNBP1Q96RU3 617 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 MRPL45Q9BRJ2 306 aaKnown RBP16.04■□□□□ 0.16
COMMD4-223ENST00000568301 RNF38Q9H0F5 515 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 AGPAT3Q9NRZ7 376 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 MYOFQ9NZM1 2061 aa16.04■□□□□ 0.16
COMMD4-223ENST00000568301 FREM2Q5SZK8 3169 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 F8VP50 259 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 SPTLC2O15270 562 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 TGFB1I1O43294 461 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 STAU1O95793 577 aaKnown RBP16.03■□□□□ 0.16
COMMD4-223ENST00000568301 DLATP10515 647 aaKnown RBP16.03■□□□□ 0.16
COMMD4-223ENST00000568301 PTPN1P18031 435 aaKnown RBP16.03■□□□□ 0.16
COMMD4-223ENST00000568301 ASIC1P78348 528 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 ZNF252P-AS1Q0IIN9 211 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 PSMD6Q15008 389 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 GAB4Q2WGN9 574 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 WDR72Q3MJ13 1102 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 USP39Q53GS9 565 aaKnown RBP16.03■□□□□ 0.16
COMMD4-223ENST00000568301 MDH1BQ5I0G3 518 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 DAB2IPQ5VWQ8 1189 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 TDRD10Q5VZ19 366 aaKnown RBP16.03■□□□□ 0.16
COMMD4-223ENST00000568301 HS2ST1Q7LGA3 356 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 RASSF3Q86WH2 238 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 RDH13Q8NBN7 331 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 TSTD1Q8NFU3 115 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 OR6B3Q8NGW1 331 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 C7orf25Q9BPX7 421 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 TPSD1Q9BZJ3 242 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 ELOVL4Q9GZR5 314 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 NME7Q9Y5B8 376 aa16.03■□□□□ 0.16
COMMD4-223ENST00000568301 UBE4BO95155 1302 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 PATE3B3GLJ2 98 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 CDX4O14627 284 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-223ENST00000568301 KHNYNO15037 678 aaKnown RBP16.02■□□□□ 0.16
COMMD4-223ENST00000568301 OAS1P00973 400 aaKnown RBP16.02■□□□□ 0.16
COMMD4-223ENST00000568301 BCKDHBP21953 392 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 EIF2DP41214 584 aaKnown RBP16.02■□□□□ 0.16
COMMD4-223ENST00000568301 TNNC1P63316 161 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 MRPS21P82921 87 aaKnown RBP16.02■□□□□ 0.16
COMMD4-223ENST00000568301 CYP24A1Q07973 514 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 TAF10Q12962 218 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 C2orf27AQ580R0 203 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 FAM26FQ5R3K3 315 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 PMS2CLQ68D20 193 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 FILIP1Q7Z7B0 1213 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 KDF1Q8NAX2 398 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-223ENST00000568301 XXYLT1Q8NBI6 393 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 CCDC127Q96BQ5 260 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 ZNF396Q96N95 335 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-223ENST00000568301 SLITRK1Q96PX8 696 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 CGRRF1Q99675 332 aa16.02■□□□□ 0.16
COMMD4-223ENST00000568301 TMEM121BQ9BXQ6 578 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-223ENST00000568301 CGNQ9P2M7 1197 aaKnown RBP16.02■□□□□ 0.16
COMMD4-223ENST00000568301 MYO18AQ92614 2054 aaKnown RBP16.02■□□□□ 0.15
COMMD4-223ENST00000568301 A0A0A0MRY4 1105 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 CUTAO60888 179 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 ABL1P00519 1130 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 CYP17A1P05093 508 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 ATICP31939 592 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 SEC13P55735 322 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 EHHADHQ08426 723 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 DHCR24Q15392 516 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 CRY1Q16526 586 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 DDX42Q86XP3 938 aaKnown RBP eCLIP16.01■□□□□ 0.15
COMMD4-223ENST00000568301 C12orf56Q8IXR9 622 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 NUP93Q8N1F7 819 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 SCFD1Q8WVM8 642 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 ZNF516Q92618 1163 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 DHX58Q96C10 678 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 CNOT6LQ96LI5 555 aaKnown RBP16.01■□□□□ 0.15
COMMD4-223ENST00000568301 PNKPQ96T60 521 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 MAGEF1Q9HAY2 307 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 TMEM9BQ9NQ34 198 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 TBC1D14Q9P2M4 693 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 TFIP11Q9UBB9 837 aaKnown RBP16.01■□□□□ 0.15
COMMD4-223ENST00000568301 MMP17Q9ULZ9 603 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 CPQQ9Y646 472 aa16.01■□□□□ 0.15
COMMD4-223ENST00000568301 A8MXQ7 604 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 CLIC2O15247 247 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 RTN3O95197 1032 aaPredicted RBP16■□□□□ 0.15
COMMD4-223ENST00000568301 YEATS4O95619 227 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 HOXB3P14651 431 aaPredicted RBP16■□□□□ 0.15
COMMD4-223ENST00000568301 CYP2J2P51589 502 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms