RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 GPR161Q8N6U8 529 aaKnown RBP10.1□□□□□ -0.79
SF3B3-211ENST00000568291 ARL14EPQ8N8R7 260 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-211ENST00000568291 LEMD2Q8NC56 503 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 SCAMP5Q8TAC9 235 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 RIN3Q8TB24 985 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 SPATA18Q8TC71 538 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 IRF7Q92985 503 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 SLC35C1Q96A29 364 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 IPO9Q96P70 1041 aaKnown RBP10.1□□□□□ -0.79
SF3B3-211ENST00000568291 PHF12Q96QT6 1004 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 FAM126AQ9BYI3 521 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-211ENST00000568291 CLSTN2Q9H4D0 955 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 ABCB6Q9NP58 842 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 CHORDC1Q9UHD1 332 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-211ENST00000568291 GMEB2Q9UKD1 530 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 CDV3Q9UKY7 258 aaKnown RBP10.1□□□□□ -0.79
SF3B3-211ENST00000568291 RAB23Q9ULC3 237 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 USP18Q9UMW8 372 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 ACACBO00763 2458 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 ATG2BQ96BY7 2078 aa10.1□□□□□ -0.79
SF3B3-211ENST00000568291 DPYSL4O14531 572 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 SLC16A3O15427 465 aaKnown RBP10.09□□□□□ -0.79
SF3B3-211ENST00000568291 AP1G2O75843 785 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 TDGF1P13385 188 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 P4HA1P13674 534 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 ANXA13P27216 316 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 CDC25CP30307 473 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 MAGEA11P43364 429 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 MAP3K7CLP57077 242 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 LMNB2Q03252 620 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 PAK1Q13153 545 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 MAPRE1Q15691 268 aaKnown RBP10.09□□□□□ -0.79
SF3B3-211ENST00000568291 TRIM68Q6AZZ1 485 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 DENND5BQ6ZUT9 1274 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 FILIP1Q7Z7B0 1213 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 CMTM8Q8IZV2 173 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 FBXL13Q8NEE6 735 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 GPT2Q8TD30 523 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 FAM3CQ92520 227 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 MRPS31Q92665 395 aaKnown RBP10.09□□□□□ -0.79
SF3B3-211ENST00000568291 TAF4BQ92750 862 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 KAT5Q92993 513 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 USP13Q92995 863 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-211ENST00000568291 FUBP3Q96I24 572 aaKnown RBP eCLIP10.09□□□□□ -0.79
SF3B3-211ENST00000568291 HEXIM2Q96MH2 286 aaKnown RBP10.09□□□□□ -0.79
SF3B3-211ENST00000568291 DCBLD2Q96PD2 775 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 GCNAQ96QF7 691 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 SMOQ99835 787 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 IMPG2Q9BZV3 1241 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 NIF3L1Q9GZT8 377 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 TRPV4Q9HBA0 871 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 TRPV5Q9NQA5 729 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 KRT82Q9NSB4 513 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 GTSE1Q9NYZ3 720 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 SDK1Q7Z5N4 2213 aa10.09□□□□□ -0.79
SF3B3-211ENST00000568291 EML5Q05BV3 1969 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 CNOT1A5YKK6 2376 aaKnown RBP10.08□□□□□ -0.8
SF3B3-211ENST00000568291 KIAA1549LQ6ZVL6 1849 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 EPG5Q9HCE0 2579 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 ZNF263O14978 683 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 FAM163BP0C2L3 166 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 SDHBP21912 280 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 GTF2H1P32780 548 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 AVPR1AP37288 418 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 FMO5P49326 533 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 CCR3P51677 355 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 NRLP54845 237 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 MCCD1P59942 119 aaPredicted RBP10.08□□□□□ -0.8
SF3B3-211ENST00000568291 APBA1Q02410 837 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 TAF10Q12962 218 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 PPP2R5DQ14738 602 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 LPAL2Q16609 132 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 DPCR1Q3MIW9 517 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 WDR44Q5JSH3 913 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 VSTM1Q6UX27 236 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 GPRIN1Q7Z2K8 1008 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 MON1AQ86VX9 555 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 MFSD6LQ8IWD5 586 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 YAF2Q8IY57 180 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 CRYBG2Q8N1P7 616 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 ZMIZ2Q8NF64 920 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 CYFIP2Q96F07 1278 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 TNIP3Q96KP6 325 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 C8orf48Q96LL4 319 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 MYRFLQ96LU7 910 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 GPR88Q9GZN0 384 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 RNF38Q9H0F5 515 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 LMAN1LQ9HAT1 526 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 PARD6AQ9NPB6 346 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 GKN1Q9NS71 199 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 CISHQ9NSE2 258 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 SMPD4Q9NXE4 827 aa10.08□□□□□ -0.8
SF3B3-211ENST00000568291 MAP1BP46821 2468 aaKnown RBP10.08□□□□□ -0.8
SF3B3-211ENST00000568291 FRYLO94915 3013 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 MYO16Q9Y6X6 1858 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 OTOL1A6NHN0 477 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-211ENST00000568291 PRR5-ARHGAP8B1AHC4 643 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 ARNTLO00327 626 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 TRIM66O15016 1216 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 STX10O60499 249 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms