RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, human

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-222	ENST00000568034	POTEH	Q6S545	545 aa		19	■□□□□ 0.63
COMMD4-222	ENST00000568034	GAREM2	Q75VX8	874 aa		19	■□□□□ 0.63
COMMD4-222	ENST00000568034	TMEM150A	Q86TG1	271 aa		19	■□□□□ 0.63
COMMD4-222	ENST00000568034	PASD1	Q8IV76	773 aa		19	■□□□□ 0.63
COMMD4-222	ENST00000568034	NUP93	Q8N1F7	819 aa		19	■□□□□ 0.63
COMMD4-222	ENST00000568034	WDTC1	Q8N5D0	677 aa		19	■□□□□ 0.63
COMMD4-222	ENST00000568034	TCEAL4	Q96EI5	215 aa		19	■□□□□ 0.63
COMMD4-222	ENST00000568034	RIPOR3	Q96MK2	946 aa		19	■□□□□ 0.63
COMMD4-222	ENST00000568034	LHX5	Q9H2C1	402 aa		19	■□□□□ 0.63
COMMD4-222	ENST00000568034	ASAH2	Q9NR71	780 aa		19	■□□□□ 0.63
COMMD4-222	ENST00000568034	OBSL1	O75147	1896 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	ADCY5	O95622	1261 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	F11	P03951	625 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	CDH5	P33151	784 aa	Predicted RBP	18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	PRKCI	P41743	596 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	KIF11	P52732	1056 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	CDR2	Q01850	454 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	GOLGA8F	Q08AF8	430 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	GOLGA8DP	Q0D2H9	430 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	SMAD2	Q15796	467 aa	Known RBP	18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	ASIC2	Q16515	512 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	HGSNAT	Q68CP4	663 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	PTCRA	Q6ISU1	281 aa	Predicted RBP	18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	PMF1	Q6P1K2	205 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	ZNF677	Q86XU0	584 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	ITFG1	Q8TB96	612 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	SHKBP1	Q8TBC3	707 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	KCTD13	Q8WZ19	329 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	SYN2	Q92777	582 aa	Predicted RBP	18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	NECTIN4	Q96NY8	510 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	LUC7L2	Q9Y383	392 aa	Known RBP	18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	USP3	Q9Y6I4	520 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	DOCK8	Q8NF50	2099 aa		18.99	■□□□□ 0.63
COMMD4-222	ENST00000568034	MFAP3L	O75121	409 aa		18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	IL9	P15248	144 aa		18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	KRT9	P35527	623 aa		18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	RGS7	P49802	495 aa		18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	KCNQ1	P51787	676 aa		18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	PDZD4	Q76G19	769 aa	Predicted RBP	18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	FMNL3	Q8IVF7	1028 aa		18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	LEMD2	Q8NC56	503 aa		18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	C1orf131	Q8NDD1	294 aa	Known RBP	18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	PCDHB18P	Q96TA0	734 aa		18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	GRPEL1	Q9HAV7	217 aa		18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	COMMD8	Q9NX08	183 aa		18.98	■□□□□ 0.63
COMMD4-222	ENST00000568034	GOLGA6L3	A6NEY3	463 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	RTN3	O95197	1032 aa	Predicted RBP	18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	CYP1A1	P04798	512 aa	Predicted RBP	18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	MYL4	P12829	197 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	GJA1	P17302	382 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	CEBPB	P17676	345 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	FSHR	P23945	695 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	YWHAQ	P27348	245 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	GABRR2	P28476	465 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	CDC25B	P30305	580 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	HNRNPH3	P31942	346 aa	Known RBP	18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	SLC8A3	P57103	927 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	NOMO3	P69849	1222 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	PDCL	Q13371	301 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	PUS10	Q3MIT2	529 aa	Known RBP	18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	BHLHA9	Q7RTU4	235 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	ZNF397	Q8NF99	534 aa	Predicted RBP	18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	STK32A	Q8WU08	396 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	HSFY1	Q96LI6	401 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	DNAJC7	Q99615	494 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	SLC4A5	Q9BY07	1137 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	NUCKS1	Q9H1E3	243 aa	Known RBP	18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	TJP2	Q9UDY2	1190 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	DENND4C	Q5VZ89	1909 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034	MYO16	Q9Y6X6	1858 aa		18.97	■□□□□ 0.63
COMMD4-222	ENST00000568034		A0A1W2PRU2	124 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	ZDHHC11B	P0C7U3	371 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	CCDC172	P0C7W6	258 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	SKIL	P12757	684 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	PGF	P49763	221 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	ADIG	Q0VDE8	80 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	IFRD2	Q12894	506 aa	Predicted RBP	18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	TAF10	Q12962	218 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	TAF12	Q16514	161 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	PTPN20	Q4JDL3	420 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	CYP4A22	Q5TCH4	519 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	WDR59	Q6PJI9	974 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	GET4	Q7L5D6	327 aa	Predicted RBP	18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	ZNF571	Q7Z3V5	609 aa	Predicted RBP	18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	AGPAT1	Q99943	283 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	HAUS4	Q9H6D7	363 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	ABHD10	Q9NUJ1	306 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	UXT	Q9UBK9	157 aa	Predicted RBP	18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	SCML2	Q9UQR0	700 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	MRPS23	Q9Y3D9	190 aa	Known RBP	18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	NCAN	O14594	1321 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	ANAPC1	Q9H1A4	1944 aa		18.96	■□□□□ 0.63
COMMD4-222	ENST00000568034	ZNF197	O14709	1029 aa		18.95	■□□□□ 0.62
COMMD4-222	ENST00000568034	LSM8	O95777	96 aa	Known RBP	18.95	■□□□□ 0.62
COMMD4-222	ENST00000568034	CDC25C	P30307	473 aa		18.95	■□□□□ 0.62
COMMD4-222	ENST00000568034	TKTL1	P51854	596 aa		18.95	■□□□□ 0.62
COMMD4-222	ENST00000568034	ADK	P55263	362 aa	Known RBP	18.95	■□□□□ 0.62
COMMD4-222	ENST00000568034	CYP4F8	P98187	520 aa		18.95	■□□□□ 0.62
COMMD4-222	ENST00000568034	TEAD2	Q15562	447 aa		18.95	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms