RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 PDGFRLQ15198 375 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 ZNF77Q15935 545 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 EDRF1Q3B7T1 1238 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 ZCWPW2Q504Y3 356 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 COBLL1Q53SF7 1204 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 DGKKQ5KSL6 1271 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 C1orf220Q5T0J3 134 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 CC2D1AQ6P1N0 951 aaPredicted RBP5.09□□□□□ -1.59
CLK3-219ENST00000567805 TXNDC11Q6PKC3 985 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 SCARA5Q6ZMJ2 495 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 SV2AQ7L0J3 742 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 UNC93AQ86WB7 457 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 FAM186BQ8IYM0 893 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 ADSSL1Q8N142 457 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 NUP93Q8N1F7 819 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 SYNPOQ8N3V7 929 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 KIAA1958Q8N8K9 716 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 ZBTB44Q8NCP5 570 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 OSCP1Q8WVF1 389 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 ATRIPQ8WXE1 791 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 OVCA2Q8WZ82 227 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 NELL1Q92832 810 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 ATP2A3Q93084 1043 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 EXOC4Q96A65 974 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 SMARCD1Q96GM5 515 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 SLITRK1Q96PX8 696 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 GSDMAQ96QA5 445 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 SLC22A12Q96S37 553 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 B3GNT5Q9BYG0 378 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 GTPBP4Q9BZE4 634 aaKnown RBP5.09□□□□□ -1.59
CLK3-219ENST00000567805 IMPG2Q9BZV3 1241 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 EBF3Q9H4W6 596 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 TRPC7Q9HCX4 862 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 HPS4Q9NQG7 708 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 GKN1Q9NS71 199 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 ZSCAN32Q9NX65 697 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 TRPM5Q9NZQ8 1165 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 GCNT4Q9P109 453 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 HOOK1Q9UJC3 728 aaKnown RBP5.09□□□□□ -1.59
CLK3-219ENST00000567805 ARHGAP26Q9UNA1 814 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 MAPK8IP1Q9UQF2 711 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 R4GN57 208 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 F5P12259 2224 aa5.09□□□□□ -1.59
CLK3-219ENST00000567805 RALGAPA1Q6GYQ0 2036 aa5.09□□□□□ -1.6
CLK3-219ENST00000567805 ATG2BQ96BY7 2078 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 MYOFQ9NZM1 2061 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 C2orf78A6NCI8 922 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 ZNF840PA6NDX5 716 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 OTOL1A6NHN0 477 aaPredicted RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 CLDN5O00501 218 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 CETN3O15182 167 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 STX10O60499 249 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 LILRB5O75023 590 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 PAPSS2O95340 614 aaPredicted RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 SMC2O95347 1197 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 NFATC1O95644 943 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 OAS1P00973 400 aaKnown RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 HLA-DRAP01903 254 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 TRIM49P0CI25 452 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 TRIM49CP0CI26 452 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 EPB41P11171 864 aaKnown RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 TDGF1P13385 188 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 ARSAP15289 507 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 HDCP19113 662 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 YWHAQP27348 245 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 GTF2H1P32780 548 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 PRCPP42785 496 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 ASPAP45381 313 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 CXCL12P48061 93 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 GCLMP48507 274 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 IFNAR2P48551 515 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 NDST1P52848 882 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 CACNA2D1P54289 1103 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 MCCD1P59942 119 aaPredicted RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 SLC7A9P82251 487 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 PPP3CAQ08209 521 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 INCA1Q0VD86 236 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 GRSF1Q12849 480 aaKnown RBP eCLIP5.08□□□□□ -1.6
CLK3-219ENST00000567805 TAF10Q12962 218 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 ADAM9Q13443 819 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 DSG2Q14126 1118 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 GAS6Q14393 721 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 PON2Q15165 354 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 EML3Q32P44 896 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 TMEM196Q5HYL7 178 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 WDR44Q5JSH3 913 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 ZNF658Q5TYW1 1059 aaPredicted RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 SNX30Q5VWJ9 437 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 KRT39Q6A163 491 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 TRIM68Q6AZZ1 485 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 TSSK4Q6SA08 328 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 Q6ZNB5 142 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 ACOT1Q86TX2 421 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 FAM35AQ86V20 835 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 ELOA2Q8IYF1 753 aaPredicted RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 SMYD4Q8IYR2 804 aaPredicted RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 FUKQ8N0W3 1084 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 CRYBG2Q8N1P7 616 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 SPEM1Q8N4L4 309 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 CPA6Q8N4T0 437 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms