RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 MTMR3Q13615 1198 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 TRIM14Q14142 442 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 SLC5A9Q2M3M2 681 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 MTSS1LQ765P7 747 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 TTC30AQ86WT1 665 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 ZNF677Q86XU0 584 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 NPAS3Q8IXF0 933 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 ZDHHC14Q8IZN3 488 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 STKLD1Q8NE28 680 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 ZMIZ2Q8NF64 920 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 ZNF606Q8WXB4 792 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 TFAP2BQ92481 460 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 FGF13Q92913 245 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 FBXO32Q969P5 355 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 NOX5Q96PH1 765 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 LRRC3Q9BY71 257 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 EDEM3Q9BZQ6 932 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 XPO4Q9C0E2 1151 aaKnown RBP12.85□□□□□ -0.35
SF3B3-208ENST00000567250 PDCL3Q9H2J4 239 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 LRRC4Q9HBW1 653 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 ZNF334Q9HCZ1 680 aaPredicted RBP12.85□□□□□ -0.35
SF3B3-208ENST00000567250 TMEM30AQ9NV96 361 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 EPS15L1Q9UBC2 864 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 ITIH6Q6UXX5 1313 aa12.85□□□□□ -0.35
SF3B3-208ENST00000567250 C2CD4DB7Z1M9 353 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 LOC730098B7Z3J9 87 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 TNFRSF10BO14763 440 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 BEST1O76090 585 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 LAMP2P13473 410 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 CYP11B1P15538 503 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 FERP16591 822 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 PFKLP17858 780 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 SSTR3P32745 418 aaPredicted RBP12.84□□□□□ -0.35
SF3B3-208ENST00000567250 PSEN1P49768 467 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 PDE4CQ08493 712 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 SARM1Q6SZW1 724 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 PIGZQ86VD9 579 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 SIX6OS1Q8N1H7 587 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 ZNF397Q8NF99 534 aaPredicted RBP12.84□□□□□ -0.35
SF3B3-208ENST00000567250 ITFG1Q8TB96 612 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 SHKBP1Q8TBC3 707 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 FEZF2Q8TBJ5 459 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 ING5Q8WYH8 240 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 NUCKS1Q9H1E3 243 aaKnown RBP12.84□□□□□ -0.35
SF3B3-208ENST00000567250 IL21Q9HBE4 155 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 TRPM5Q9NZQ8 1165 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 PCDHGC3Q9UN70 934 aa12.84□□□□□ -0.35
SF3B3-208ENST00000567250 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.84□□□□□ -0.351e-11■■□□□ 13.7
SF3B3-208ENST00000567250 SPTBN5Q9NRC6 3674 aaKnown RBP12.83□□□□□ -0.36
SF3B3-208ENST00000567250 A0A1W2PQJ5 194 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 FAM92AA1XBS5 289 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 GFPT2O94808 682 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 F11P03951 625 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 TPM1P09493 284 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 PNMA6AP0CW24 399 aaPredicted RBP12.83□□□□□ -0.36
SF3B3-208ENST00000567250 CLCN1P35523 988 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 AVPR1AP37288 418 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 CCR2P41597 374 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 SNX16P57768 344 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 USP46P62068 366 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 TEAD2Q15562 447 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 PKDCCQ504Y2 493 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 GPR158Q5T848 1215 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 GAREM2Q75VX8 874 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 SLC47A2Q86VL8 602 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 ARHGAP18Q8N392 663 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 MSANTD4Q8NCY6 345 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 UBA3Q8TBC4 463 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 EPS8L1Q8TE68 723 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 KCTD13Q8WZ19 329 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 SECISBP2LQ93073 1101 aaKnown RBP12.83□□□□□ -0.36
SF3B3-208ENST00000567250 NXPE3Q969Y0 559 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 TCEAL4Q96EI5 215 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 HSFY1Q96LI6 401 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 MYADMQ96S97 322 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 UHRF1Q96T88 793 aaPredicted RBP12.83□□□□□ -0.36
SF3B3-208ENST00000567250 TASP1Q9H6P5 420 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 CYLDQ9NQC7 956 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 TLR8Q9NR97 1041 aaKnown RBP12.83□□□□□ -0.36
SF3B3-208ENST00000567250 IL37Q9NZH6 218 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 IGSF9Q9P2J2 1179 aa12.83□□□□□ -0.36
SF3B3-208ENST00000567250 TRAV19A0A0A6YYK7 116 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 C19orf67A6NJJ6 358 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 HHLA1C9JL84 531 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 SART1O43290 800 aaKnown RBP12.82□□□□□ -0.36
SF3B3-208ENST00000567250 TADA3O75528 432 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 LSM8O95777 96 aaKnown RBP12.82□□□□□ -0.36
SF3B3-208ENST00000567250 GJA1P17302 382 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 PBX1P40424 430 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 ACADSBP45954 432 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 TUBP50607 506 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 TKTL1P51854 596 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 KIF11P52732 1056 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 CYP4F8P98187 520 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 ADIGQ0VDE8 80 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 TAF10Q12962 218 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 RAB41Q5JT25 222 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 SPECC1LQ69YQ0 1117 aa12.82□□□□□ -0.36
SF3B3-208ENST00000567250 GPRIN1Q7Z2K8 1008 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms