RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 TTYH3Q9C0H2 523 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 CRISPLD1Q9H336 500 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 KRT82Q9NSB4 513 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 FAM49BQ9NUQ9 324 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 UXTQ9UBK9 157 aaPredicted RBP17.68■□□□□ 0.42
CLN6-208ENST00000567060 ZMYM5Q9UJ78 669 aa17.68■□□□□ 0.42
CLN6-208ENST00000567060 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.68■□□□□ 0.42
CLN6-208ENST00000567060 EPHB6O15197 1021 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 RFPL2O75678 378 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 AP1G2O75843 785 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 MICAL2O94851 1124 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 TPM1P09493 284 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 CCDC130P13994 396 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 PTPN2P17706 415 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 EPHA5P54756 1037 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 ERMP1Q7Z2K6 904 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 VSTM4Q8IW00 320 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 ZNF606Q8WXB4 792 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 SYN2Q92777 582 aaPredicted RBP17.67■□□□□ 0.42
CLN6-208ENST00000567060 ZNF707Q96C28 371 aaPredicted RBP17.67■□□□□ 0.42
CLN6-208ENST00000567060 TRMT2BQ96GJ1 504 aaKnown RBP17.67■□□□□ 0.42
CLN6-208ENST00000567060 MYRFLQ96LU7 910 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 MFSD1Q9H3U5 465 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 PIDD1Q9HB75 910 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 NLRC4Q9NPP4 1024 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 AJAP1Q9UKB5 411 aaPredicted RBP17.67■□□□□ 0.42
CLN6-208ENST00000567060 TSPAN16Q9UKR8 245 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 PCDHGC3Q9UN70 934 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 SLC27A5Q9Y2P5 690 aa17.67■□□□□ 0.42
CLN6-208ENST00000567060 MYH10P35580 1976 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 SOBPA7XYQ1 873 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 ZNF197O14709 1029 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 CYP26A1O43174 497 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 RTN3O95197 1032 aaPredicted RBP17.66■□□□□ 0.42
CLN6-208ENST00000567060 FERP16591 822 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 ATF6P18850 670 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 CLCN1P35523 988 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 ID4P47928 161 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 PPP3CCP48454 512 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 PDE6CP51160 858 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 PLCB2Q00722 1185 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 BST2Q10589 180 aaKnown RBP17.66■□□□□ 0.42
CLN6-208ENST00000567060 ORC1Q13415 861 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 TAF12Q16514 161 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 TMC5Q6UXY8 1006 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 CLEC20AQ6ZU45 233 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 DENND5BQ6ZUT9 1274 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 SCN4BQ8IWT1 228 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 TTC9BQ8N6N2 239 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 FLCNQ8NFG4 579 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 WDR6Q9NNW5 1121 aaKnown RBP17.66■□□□□ 0.42
CLN6-208ENST00000567060 CYLDQ9NQC7 956 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 CAPN11Q9UMQ6 739 aa17.66■□□□□ 0.42
CLN6-208ENST00000567060 F8VP50 259 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 CLDN5O00501 218 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 XPO1O14980 1071 aaKnown RBP17.65■□□□□ 0.42
CLN6-208ENST00000567060 CCL16O15467 120 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 THAP12O43422 761 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 CYP11B1P15538 503 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 AOC1P19801 751 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 ADORA2BP29275 332 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 ZBED6P86452 979 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 CCDC142Q17RM4 750 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 PABPC1LQ4VXU2 614 aaKnown RBP17.65■□□□□ 0.42
CLN6-208ENST00000567060 PKDCCQ504Y2 493 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 CYP4A22Q5TCH4 519 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 DNAJB7Q7Z6W7 309 aaPredicted RBP17.65■□□□□ 0.42
CLN6-208ENST00000567060 NUP93Q8N1F7 819 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 STK32AQ8WU08 396 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 TFAP2BQ92481 460 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 BAP1Q92560 729 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 TTLL2Q9BWV7 592 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 LHX5Q9H2C1 402 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 FBXO44Q9H4M3 255 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 ASAH2Q9NR71 780 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 AIPL1Q9NZN9 384 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 LUC7L2Q9Y383 392 aaKnown RBP17.65■□□□□ 0.42
CLN6-208ENST00000567060 CEP83Q9Y592 693 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 CLUHO75153 1309 aa17.65■□□□□ 0.42
CLN6-208ENST00000567060 BRD2P25440 801 aaKnown RBP17.64■□□□□ 0.41
CLN6-208ENST00000567060 CDC25CP30307 473 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 KRT9P35527 623 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 PLA2G4AP47712 749 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 SNX16P57768 344 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 DDR2Q16832 855 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 GOLGA7BQ2TAP0 167 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 KCTD13Q8WZ19 329 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 OVCA2Q8WZ82 227 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 HSFY1Q96LI6 401 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 SMOQ99835 787 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 LPIN3Q9BQK8 851 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 IL37Q9NZH6 218 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 BZW2Q9Y6E2 419 aaKnown RBP17.64■□□□□ 0.41
CLN6-208ENST00000567060 ZFP37Q9Y6Q3 630 aaPredicted RBP17.64■□□□□ 0.41
CLN6-208ENST00000567060 NCANO14594 1321 aa17.64■□□□□ 0.41
CLN6-208ENST00000567060 PATJQ8NI35 1801 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 GREB1Q4ZG55 1949 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 FAM92AA1XBS5 289 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 SLC38A8A6NNN8 435 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 LSM8O95777 96 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms