RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 SNNO75324 88 aaPredicted RBP26.07■■□□□ 1.76
FANCA-221ENST00000566889 TNFAIP8O95379 198 aa26.07■■□□□ 1.76
FANCA-221ENST00000566889 SERPINB6P35237 376 aa26.07■■□□□ 1.76
FANCA-221ENST00000566889 UBAP2LQ14157 1087 aaKnown RBP26.07■■□□□ 1.76
FANCA-221ENST00000566889 CHI3L2Q15782 390 aa26.07■■□□□ 1.76
FANCA-221ENST00000566889 LINC00116Q8NCU8 138 aa26.07■■□□□ 1.76
FANCA-221ENST00000566889 ZNF696Q9H7X3 374 aa26.07■■□□□ 1.76
FANCA-221ENST00000566889 DDX18Q9NVP1 670 aaKnown RBP26.07■■□□□ 1.76
FANCA-221ENST00000566889 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.06■■□□□ 1.76
FANCA-221ENST00000566889 TCRBV9S1A1TA0A576 114 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 UFL1O94874 794 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 RAG1P15918 1043 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 COPAP53621 1224 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 HIRAP54198 1017 aaPredicted RBP26.06■■□□□ 1.76
FANCA-221ENST00000566889 ADRM1Q16186 407 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 GRAMD1BQ3KR37 738 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 KBTBD12Q3ZCT8 623 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 SLC26A11Q86WA9 606 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 NUDCD3Q8IVD9 361 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 CCDC33Q8N5R6 958 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 METTL25Q8N6Q8 603 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 ZFP28Q8NHY6 868 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 ABTB1Q969K4 478 aaPredicted RBP26.06■■□□□ 1.76
FANCA-221ENST00000566889 XPO7Q9UIA9 1087 aaKnown RBP26.06■■□□□ 1.76
FANCA-221ENST00000566889 IVNS1ABPQ9Y6Y0 642 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 ASTN2O75129 1339 aaPredicted RBP26.06■■□□□ 1.76
FANCA-221ENST00000566889 KRT37O76014 449 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 CDKN2BP42772 138 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 GPSM2P81274 684 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 TLR1Q15399 786 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 CEP55Q53EZ4 464 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 CDHR3Q6ZTQ4 885 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 ABRAQ8N0Z2 381 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 TTC13Q8NBP0 860 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 GMCL1Q96IK5 515 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 TOPORSQ9NS56 1045 aaPredicted RBP26.06■■□□□ 1.76
FANCA-221ENST00000566889 C6orf203Q9P0P8 240 aaPredicted RBP26.06■■□□□ 1.76
FANCA-221ENST00000566889 CDH22Q9UJ99 828 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 EFR3BQ9Y2G0 817 aa26.06■■□□□ 1.76
FANCA-221ENST00000566889 BIRC5O15392 142 aa26.05■■□□□ 1.76
FANCA-221ENST00000566889 SNRPAP09012 282 aaKnown RBP26.05■■□□□ 1.76
FANCA-221ENST00000566889 ABCD1P33897 745 aa26.05■■□□□ 1.76
FANCA-221ENST00000566889 IKQ13123 557 aaPredicted RBP26.05■■□□□ 1.76
FANCA-221ENST00000566889 TMED1Q13445 227 aa26.05■■□□□ 1.76
FANCA-221ENST00000566889 LGSNQ5TDP6 509 aa26.05■■□□□ 1.76
FANCA-221ENST00000566889 PLA2G4FQ68DD2 849 aa26.05■■□□□ 1.76
FANCA-221ENST00000566889 MECRQ9BV79 373 aa26.05■■□□□ 1.76
FANCA-221ENST00000566889 EHMT1Q9H9B1 1298 aa26.05■■□□□ 1.76
FANCA-221ENST00000566889 PNPLA8Q9NP80 782 aa26.05■■□□□ 1.76
FANCA-221ENST00000566889 KCNQ5Q9NR82 932 aa26.05■■□□□ 1.76
FANCA-221ENST00000566889 ZNF180Q9UJW8 692 aa26.05■■□□□ 1.76
FANCA-221ENST00000566889 SF3B1O75533 1304 aaKnown RBP eCLIP26.05■■□□□ 1.762e-7■■■■■ 59.9
FANCA-221ENST00000566889 PMLP29590 882 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 RPL22P35268 128 aaKnown RBP26.04■■□□□ 1.76
FANCA-221ENST00000566889 ANGEL2Q5VTE6 544 aaKnown RBP26.04■■□□□ 1.76
FANCA-221ENST00000566889 SLC51AQ86UW1 340 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 GCNAQ96QF7 691 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 COL14A1Q05707 1796 aaKnown RBP26.04■■□□□ 1.76
FANCA-221ENST00000566889 ZNF831Q5JPB2 1677 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 TRIM49D1C9J1S8 452 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 CD48P09326 243 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 KITP10721 976 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 ALDH1A3P47895 512 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 CBX3Q13185 183 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 KRT81Q14533 505 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 USP41Q3LFD5 358 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 ARCQ7LC44 396 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 GMCL1P1Q8NEA9 526 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 RSAD2Q8WXG1 361 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 FBXL18Q96ME1 805 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 PADI4Q9UM07 663 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 POMPQ9Y244 141 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 INPP5FQ9Y2H2 1132 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 CNTNAP4Q9C0A0 1308 aa26.04■■□□□ 1.76
FANCA-221ENST00000566889 TMEM191CA6NGB0 347 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 TMEM221A6NGB7 291 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 TMEM63AO94886 807 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 TMEM191BP0C7N4 346 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 EPHB1P54762 984 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 MYLK3Q32MK0 819 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 RABGAP1LQ5R372 815 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 DUS1LQ6P1R4 473 aaKnown RBP26.03■■□□□ 1.76
FANCA-221ENST00000566889 KBTBD6Q86V97 674 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 TMEM126BQ8IUX1 230 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 WDR75Q8IWA0 830 aaKnown RBP26.03■■□□□ 1.76
FANCA-221ENST00000566889 SENP6Q9GZR1 1112 aaPredicted RBP26.03■■□□□ 1.76
FANCA-221ENST00000566889 THAP1Q9NVV9 213 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 PPP1R1BQ9UD71 204 aaPredicted RBP26.03■■□□□ 1.76
FANCA-221ENST00000566889 GGA1Q9UJY5 639 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 PAIP2BQ9ULR5 123 aaKnown RBP26.03■■□□□ 1.76
FANCA-221ENST00000566889 DNAJA2O60884 412 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 TCF4P15884 667 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 ELK3P41970 407 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 CYP24A1Q07973 514 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 CROCCP3Q8IVE0 287 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 DCUN1D1Q96GG9 259 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 RIT2Q99578 217 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 PI4K2AQ9BTU6 479 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 PCDH18Q9HCL0 1135 aa26.03■■□□□ 1.76
FANCA-221ENST00000566889 MARCOQ9UEW3 520 aaPredicted RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms