RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 IFNB1P01574 187 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 INSRRP14616 1297 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 TFDP1Q14186 410 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 SLC1A5Q15758 541 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 SLC45A4Q5BKX6 768 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 EFCAB12Q6NXP0 572 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 MPZL3Q6UWV2 235 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 VSIG1Q86XK7 387 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 SMC1BQ8NDV3 1235 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 RSAD2Q8WXG1 361 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 SOCS4Q8WXH5 440 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 NFKBIZQ9BYH8 718 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 VPS11Q9H270 941 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 ETNK1Q9HBU6 452 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 PTPRHQ9HD43 1115 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 GRID1Q9ULK0 1009 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 TTLL13PA6NNM8 815 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 H3BRB1 525 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 APOC4-APOC2K7ER74 178 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 C2CD2LO14523 706 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 CST8O60676 142 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 IGHA2P01877 340 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 APOC2P02655 101 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 MMP3P08254 477 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 ATP2A2P16615 1042 aaKnown RBP17.53■□□□□ 0.4
CMTM3-213ENST00000566756 RPL22P35268 128 aaKnown RBP17.53■□□□□ 0.4
CMTM3-213ENST00000566756 TNFAIP2Q03169 654 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 MYO1EQ12965 1108 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 SCARA3Q6AZY7 606 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 DENND1BQ6P3S1 775 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 ZBTB33Q86T24 672 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 C4orf33Q8N1A6 199 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 KIF2BQ8N4N8 673 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 LRRC71Q8N4P6 559 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 ARFGAP1Q8N6T3 406 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 LINC01465Q8N7H1 131 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 MAB21L3Q8N8X9 362 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 OR6J1Q8NGC5 347 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 MZB1Q8WU39 189 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 ZNF75CPQ92670 426 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-213ENST00000566756 N4BP2L2Q92802 583 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-213ENST00000566756 HAUS1Q96CS2 278 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 ERP27Q96DN0 273 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 STAMBPL1Q96FJ0 436 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 MAK16Q9BXY0 300 aaKnown RBP17.53■□□□□ 0.4
CMTM3-213ENST00000566756 FAM124BQ9H5Z6 455 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-213ENST00000566756 TUT1Q9H6E5 874 aaKnown RBP17.53■□□□□ 0.4
CMTM3-213ENST00000566756 KIF9Q9HAQ2 790 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 SAR1AQ9NR31 198 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 GJD2Q9UKL4 321 aa17.53■□□□□ 0.4
CMTM3-213ENST00000566756 SPAG6O75602 509 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 KRT4P19013 534 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 RGS2P41220 211 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 GABRB2P47870 512 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 RNASELQ05823 741 aaKnown RBP17.52■□□□□ 0.4
CMTM3-213ENST00000566756 DGKDQ16760 1214 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 ZNF394Q53GI3 561 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 CYP4A22Q5TCH4 519 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 FYB2Q5VWT5 728 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 PDIK1LQ8N165 341 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 PLCD3Q8N3E9 789 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 RNF149Q8NC42 400 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 SH3TC2Q8TF17 1288 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 GPBP1L1Q9HC44 474 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-213ENST00000566756 BATF3Q9NR55 127 aa17.52■□□□□ 0.4
CMTM3-213ENST00000566756 A0A1W2PPM1 405 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 ACKR2O00590 384 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 CA12O43570 354 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 IL1R2P27930 398 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 STIP1P31948 543 aaKnown RBP17.51■□□□□ 0.39
CMTM3-213ENST00000566756 PCK1P35558 622 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 PSMC1P62191 440 aaKnown RBP17.51■□□□□ 0.39
CMTM3-213ENST00000566756 TFAMQ00059 246 aaKnown RBP17.51■□□□□ 0.39
CMTM3-213ENST00000566756 LVRNQ6Q4G3 990 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 XYLT1Q86Y38 959 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 GPATCH11Q8N954 259 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 CFAP61Q8NHU2 1237 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 TRAPPC12Q8WVT3 735 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 PAFAH2Q99487 392 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 FRMD8Q9BZ67 464 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-213ENST00000566756 FZD8Q9H461 694 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 RSAD1Q9HA92 442 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 SLCO1B3Q9NPD5 702 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 GNEQ9Y223 722 aaKnown RBP17.51■□□□□ 0.39
CMTM3-213ENST00000566756 A6NJR5 290 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 TMEM88BA6NKF7 163 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 E7ENQ6 273 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 KIF3CO14782 793 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 ADCY6O43306 1168 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 FAM155BO75949 473 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 ZNF865P0CJ78 1059 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-213ENST00000566756 SRGAP2CP0DJJ0 459 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 CRHR2Q13324 411 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 CRYMQ14894 314 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 FNBP1LQ5T0N5 605 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 C3orf62Q6ZUJ4 267 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 OTOAQ7RTW8 1153 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 IFNLR1Q8IU57 520 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-213ENST00000566756 RHPN2Q8IUC4 686 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 BANPQ8N9N5 519 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms