RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 KCTD13Q8WZ19 329 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 GOLGA1Q92805 767 aa18.59■□□□□ 0.57
HERC2-208ENST00000566635 RNPC3Q96LT9 517 aaKnown RBP18.59■□□□□ 0.57
HERC2-208ENST00000566635 C2CD4BA6NLJ0 364 aa18.58■□□□□ 0.57
HERC2-208ENST00000566635 HHLA1C9JL84 531 aa18.58■□□□□ 0.57
HERC2-208ENST00000566635 GPD1P21695 349 aa18.58■□□□□ 0.57
HERC2-208ENST00000566635 PAFAH1B1P43034 410 aa18.58■□□□□ 0.57
HERC2-208ENST00000566635 SNX16P57768 344 aa18.58■□□□□ 0.57
HERC2-208ENST00000566635 ELAVL2Q12926 359 aaKnown RBP18.58■□□□□ 0.57
HERC2-208ENST00000566635 MAPRE1Q15691 268 aaKnown RBP18.58■□□□□ 0.57
HERC2-208ENST00000566635 ZDHHC17Q8IUH5 632 aa18.58■□□□□ 0.57
HERC2-208ENST00000566635 SPATA2LQ8IUW3 424 aaPredicted RBP18.58■□□□□ 0.57
HERC2-208ENST00000566635 ARFGAP1Q8N6T3 406 aa18.58■□□□□ 0.57
HERC2-208ENST00000566635 RXFP2Q8WXD0 754 aa18.58■□□□□ 0.57
HERC2-208ENST00000566635 LRRC4Q9HBW1 653 aa18.58■□□□□ 0.57
HERC2-208ENST00000566635 PYGMP11217 842 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 TKTL1P51854 596 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 RWDD2BP57060 319 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 ELF2Q15723 593 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 C15orf59Q2T9L4 293 aaPredicted RBP18.58■□□□□ 0.56
HERC2-208ENST00000566635 SH3PXD2AQ5TCZ1 1133 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 KCNT2Q6UVM3 1135 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 RSPO2Q6UXX9 243 aaPredicted RBP18.58■□□□□ 0.56
HERC2-208ENST00000566635 CMTR2Q8IYT2 770 aaKnown RBP18.58■□□□□ 0.56
HERC2-208ENST00000566635 SIX6OS1Q8N1H7 587 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 SPATA4Q8NEY3 305 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 ACTRT1Q8TDG2 376 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 IGSF21Q96ID5 467 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 EPC1Q9H2F5 836 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 CSNK1G1Q9HCP0 422 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 KLHL11Q9NVR0 708 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 ABI2Q9NYB9 513 aaPredicted RBP18.58■□□□□ 0.56
HERC2-208ENST00000566635 CXXC1Q9P0U4 656 aaPredicted RBP18.58■□□□□ 0.56
HERC2-208ENST00000566635 LCMT1Q9UIC8 334 aa18.58■□□□□ 0.56
HERC2-208ENST00000566635 PGRMC1O00264 195 aaKnown RBP18.57■□□□□ 0.56
HERC2-208ENST00000566635 PSTPIP1O43586 416 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 LRCH4O75427 683 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 EFEMP2O95967 443 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 FGBP02675 491 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 PDGFRAP16234 1089 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 CYP2F1P24903 491 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 RAB6CQ53S08 254 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 TXNRD3NBQ6F5E7 133 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 PRSS55Q6UWB4 352 aaPredicted RBP18.57■□□□□ 0.56
HERC2-208ENST00000566635 C4orf50Q6ZRC1 276 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 SLC26A9Q7LBE3 791 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 RHOT1Q8IXI2 618 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 CFAP57Q96MR6 1250 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 PGLYRP2Q96PD5 576 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 YME1L1Q96TA2 773 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.57■□□□□ 0.56
HERC2-208ENST00000566635 TTPALQ9BTX7 342 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 RAB6CQ9H0N0 254 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 DMAP1Q9NPF5 467 aaPredicted RBP18.57■□□□□ 0.56
HERC2-208ENST00000566635 RBM12Q9NTZ6 932 aaKnown RBP18.57■□□□□ 0.56
HERC2-208ENST00000566635 RNF14Q9UBS8 474 aa18.57■□□□□ 0.56
HERC2-208ENST00000566635 FGGP02679 453 aa18.56■□□□□ 0.56
HERC2-208ENST00000566635 ZNF143P52747 638 aaPredicted RBP18.56■□□□□ 0.56
HERC2-208ENST00000566635 ARPP19P56211 112 aa18.56■□□□□ 0.56
HERC2-208ENST00000566635 DCP1BQ8IZD4 617 aaKnown RBP18.56■□□□□ 0.56
HERC2-208ENST00000566635 UBXN4Q92575 508 aa18.56■□□□□ 0.56
HERC2-208ENST00000566635 ULBP1Q9BZM6 244 aa18.56■□□□□ 0.56
HERC2-208ENST00000566635 LLGL1Q15334 1064 aa18.56■□□□□ 0.56
HERC2-208ENST00000566635 CDO1Q16878 200 aa18.56■□□□□ 0.56
HERC2-208ENST00000566635 CCDC14Q49A88 953 aa18.56■□□□□ 0.56
HERC2-208ENST00000566635 ATP13A4Q4VNC1 1196 aa18.56■□□□□ 0.56
HERC2-208ENST00000566635 RAB41Q5JT25 222 aa18.56■□□□□ 0.56
HERC2-208ENST00000566635 TMEM240Q5SV17 173 aa18.56■□□□□ 0.56
HERC2-208ENST00000566635 ACSF2Q96CM8 615 aaPredicted RBP18.56■□□□□ 0.56
HERC2-208ENST00000566635 ZNF558Q96NG5 402 aa18.56■□□□□ 0.56
HERC2-208ENST00000566635 ZMYND8Q9ULU4 1186 aaPredicted RBP18.56■□□□□ 0.56
HERC2-208ENST00000566635 OR6C75A6NL08 312 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 CAPN15O75808 1086 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 SCNN1AP37088 669 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 MRPS5P82675 430 aaKnown RBP18.55■□□□□ 0.56
HERC2-208ENST00000566635 SLC25A11Q02978 314 aaKnown RBP18.55■□□□□ 0.56
HERC2-208ENST00000566635 SEL1L2Q5TEA6 688 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 ADAT2Q7Z6V5 191 aaKnown RBP18.55■□□□□ 0.56
HERC2-208ENST00000566635 RNF168Q8IYW5 571 aaPredicted RBP18.55■□□□□ 0.56
HERC2-208ENST00000566635 SLC39A11Q8N1S5 342 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 COLGALT1Q8NBJ5 622 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 RPGRIP1Q96KN7 1286 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 AP1M1Q9BXS5 423 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.55■□□□□ 0.56
HERC2-208ENST00000566635 DPYSL4O14531 572 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 TBC1D4O60343 1298 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 TFE3P19532 575 aaPredicted RBP18.55■□□□□ 0.56
HERC2-208ENST00000566635 IL1R2P27930 398 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 ATP11AP98196 1134 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 HFE2Q6ZVN8 426 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 FAM149B1Q96BN6 582 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 CNPY3Q9BT09 278 aa18.55■□□□□ 0.56
HERC2-208ENST00000566635 TTC7AQ9ULT0 858 aaPredicted RBP18.55■□□□□ 0.56
HERC2-208ENST00000566635 GJB5O95377 273 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 USP17L7P0C7H9 530 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 CPB1P15086 417 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 SDC4P31431 198 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 GRIK1P39086 918 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 DAOAP59103 153 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 NFE2Q16621 373 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms