RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 FAM200BP0CF97 657 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 FMO5P49326 533 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 TNK2Q07912 1038 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 CETN1Q12798 172 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 FBXO32Q969P5 355 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 SMOQ99835 787 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 CLSTN2Q9H4D0 955 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 C8orf33Q9H7E9 229 aaPredicted RBP20.47■□□□□ 0.87
CCDC113-204ENST00000566498 GCNT4Q9P109 453 aa20.47■□□□□ 0.87
CCDC113-204ENST00000566498 TARSP26639 723 aaKnown RBP20.46■□□□□ 0.87
CCDC113-204ENST00000566498 SOX9P48436 509 aa20.46■□□□□ 0.87
CCDC113-204ENST00000566498 MLLT6P55198 1093 aaPredicted RBP20.46■□□□□ 0.87
CCDC113-204ENST00000566498 ZNF268Q14587 947 aaPredicted RBP20.46■□□□□ 0.87
CCDC113-204ENST00000566498 ANGPT1Q15389 498 aa20.46■□□□□ 0.87
CCDC113-204ENST00000566498 CLEC17AQ6ZS10 378 aa20.46■□□□□ 0.87
CCDC113-204ENST00000566498 JAKMIP2Q96AA8 810 aa20.46■□□□□ 0.87
CCDC113-204ENST00000566498 TMEM176AQ96HP8 235 aa20.46■□□□□ 0.87
CCDC113-204ENST00000566498 GBP4Q96PP9 640 aa20.46■□□□□ 0.87
CCDC113-204ENST00000566498 ARID3AQ99856 593 aa20.46■□□□□ 0.87
CCDC113-204ENST00000566498 FAM86C1Q9NVL1 165 aa20.46■□□□□ 0.87
CCDC113-204ENST00000566498 DLGAP2Q9P1A6 1054 aa20.46■□□□□ 0.87
CCDC113-204ENST00000566498 ANAPC1Q9H1A4 1944 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 TNFRSF10BO14763 440 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 CCDC192P0DO97 292 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 SLC5A3P53794 718 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 CUL2Q13617 745 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 ITPRIPL2Q3MIP1 535 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 MLKLQ8NB16 471 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 PDZD8Q8NEN9 1154 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 SH3RF2Q8TEC5 729 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 IPO9Q96P70 1041 aaKnown RBP20.45■□□□□ 0.86
CCDC113-204ENST00000566498 FAM83CQ9BQN1 747 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 RNF38Q9H0F5 515 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 NUP62CLQ9H1M0 184 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 EBF3Q9H4W6 596 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 CSNK1G1Q9HCP0 422 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 LMBRD1Q9NUN5 540 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 SPATA6Q9NWH7 488 aaPredicted RBP20.45■□□□□ 0.86
CCDC113-204ENST00000566498 COMMD8Q9NX08 183 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 RWDD2AQ9UIY3 292 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.45■□□□□ 0.86
CCDC113-204ENST00000566498 MIA3Q5JRA6 1907 aa20.45■□□□□ 0.86
CCDC113-204ENST00000566498 SPECC1L-ADORA2AF8WAN1 911 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 PFKLP17858 780 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 RAD23BP54727 409 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 YWHAEP62258 255 aaKnown RBP20.44■□□□□ 0.86
CCDC113-204ENST00000566498 KCNH2Q12809 1159 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 RUNX3Q13761 415 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 MTF1Q14872 753 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 TPD52L1Q16890 204 aaPredicted RBP20.44■□□□□ 0.86
CCDC113-204ENST00000566498 PPP1R26Q5T8A7 1209 aaPredicted RBP20.44■□□□□ 0.86
CCDC113-204ENST00000566498 TRIM68Q6AZZ1 485 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 RALGPS2Q86X27 583 aaPredicted RBP20.44■□□□□ 0.86
CCDC113-204ENST00000566498 C1orf210Q8IVY1 113 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 ZMIZ2Q8NF64 920 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 MSANTD3Q96H12 275 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 FBXO44Q9H4M3 255 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 LMAN1LQ9HAT1 526 aa20.44■□□□□ 0.86
CCDC113-204ENST00000566498 DUS2Q9NX74 493 aaKnown RBP20.44■□□□□ 0.86
CCDC113-204ENST00000566498 SHISA7A6NL88 538 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 PDGFRLQ15198 375 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 HECTD3Q5T447 861 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 C1orf228Q6PIY5 440 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 CLEC20AQ6ZU45 233 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 TRIM59Q8IWR1 403 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 SLC4A11Q8NBS3 891 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 OVCA2Q8WZ82 227 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 CLDN23Q96B33 292 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 NT5C1BQ96P26 610 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 PHOX2BQ99453 314 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 DUSP16Q9BY84 665 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 FAM124BQ9H5Z6 455 aaPredicted RBP20.43■□□□□ 0.86
CCDC113-204ENST00000566498 SMPD4Q9NXE4 827 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 IL37Q9NZH6 218 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 ARHGAP26Q9UNA1 814 aa20.43■□□□□ 0.86
CCDC113-204ENST00000566498 PMM2O15305 246 aa20.42■□□□□ 0.86
CCDC113-204ENST00000566498 MBL2P11226 248 aaPredicted RBP20.42■□□□□ 0.86
CCDC113-204ENST00000566498 ARSAP15289 507 aa20.42■□□□□ 0.86
CCDC113-204ENST00000566498 ACO1P21399 889 aaKnown RBP20.42■□□□□ 0.86
CCDC113-204ENST00000566498 TBXAS1P24557 533 aaPredicted RBP20.42■□□□□ 0.86
CCDC113-204ENST00000566498 CTHP32929 405 aa20.42■□□□□ 0.86
CCDC113-204ENST00000566498 MAGEA9P43362 315 aa20.42■□□□□ 0.86
CCDC113-204ENST00000566498 IFNAR2P48551 515 aa20.42■□□□□ 0.86
CCDC113-204ENST00000566498 ZNF77Q15935 545 aa20.42■□□□□ 0.86
CCDC113-204ENST00000566498 ALYREFQ86V81 257 aaKnown RBP20.42■□□□□ 0.86
CCDC113-204ENST00000566498 RIN3Q8TB24 985 aa20.42■□□□□ 0.86
CCDC113-204ENST00000566498 NACA2Q9H009 215 aa20.42■□□□□ 0.86
CCDC113-204ENST00000566498 GMIPQ9P107 970 aa20.42■□□□□ 0.86
CCDC113-204ENST00000566498 GOLGA6L22H0YM25 854 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 LEFTY2O00292 366 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 P4HA2O15460 535 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 LAMTOR5O43504 91 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 AFPP02771 609 aaKnown RBP20.41■□□□□ 0.86
CCDC113-204ENST00000566498 RPS9P46781 194 aaKnown RBP20.41■□□□□ 0.86
CCDC113-204ENST00000566498 MARSP56192 900 aaKnown RBP20.41■□□□□ 0.86
CCDC113-204ENST00000566498 SLC8A3P57103 927 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 SLC7A9P82251 487 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 AMPD2Q01433 879 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 FZD5Q13467 585 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 PON2Q15165 354 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms