RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 UBA3Q8TBC4 463 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 SLC35F5Q8WV83 523 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 SECISBP2LQ93073 1101 aaKnown RBP8.63□□□□□ -1.03
CDH13-208ENST00000566333 TCEAL4Q96EI5 215 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 MYRFLQ96LU7 910 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 DNAJC7Q99615 494 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 CORO1BQ9BR76 489 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 NUP58Q9BVL2 599 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 DNAI2Q9GZS0 605 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 POMKQ9H5K3 350 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 GRPEL1Q9HAV7 217 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 AVENQ9NQS1 362 aaPredicted RBP8.63□□□□□ -1.03
CDH13-208ENST00000566333 IL37Q9NZH6 218 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 AIPL1Q9NZN9 384 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 THEGQ9P2T0 379 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 TJP2Q9UDY2 1190 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 ASB3Q9Y575 518 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.63□□□□□ -1.03
CDH13-208ENST00000566333 TICRRQ7Z2Z1 1910 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 MED7O43513 233 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 ADCY5O95622 1261 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 MMEP08473 750 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 CSH1P0DML2 217 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 CSH2P0DML3 217 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 FERP16591 822 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 CEBPBP17676 345 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 ANXA13P27216 316 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 CDC25BP30305 580 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 HNRNPH3P31942 346 aaKnown RBP8.62□□□□□ -1.03
CDH13-208ENST00000566333 RPL34P49207 117 aaKnown RBP8.62□□□□□ -1.03
CDH13-208ENST00000566333 PGFP49763 221 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 KCNQ1P51787 676 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 BPIFB4P59827 614 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 NOMO3P69849 1222 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 CDR2Q01850 454 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 PDCLQ13371 301 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 CBX2Q14781 532 aaPredicted RBP8.62□□□□□ -1.03
CDH13-208ENST00000566333 VEPH1Q14D04 833 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 SMAD2Q15796 467 aaKnown RBP8.62□□□□□ -1.03
CDH13-208ENST00000566333 ASIC2Q16515 512 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 PTPN20Q4JDL3 420 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 PABPC1LQ4VXU2 614 aaKnown RBP8.62□□□□□ -1.03
CDH13-208ENST00000566333 STXBP5Q5T5C0 1151 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 PMF1Q6P1K2 205 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 WDR59Q6PJI9 974 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 DENND5BQ6ZUT9 1274 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 DNAJB7Q7Z6W7 309 aaPredicted RBP8.62□□□□□ -1.03
CDH13-208ENST00000566333 ITIH5Q86UX2 942 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 WDTC1Q8N5D0 677 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 TC2NQ8N9U0 490 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 C1orf131Q8NDD1 294 aaKnown RBP8.62□□□□□ -1.03
CDH13-208ENST00000566333 ITFG1Q8TB96 612 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 SHKBP1Q8TBC3 707 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 SYN2Q92777 582 aaPredicted RBP8.62□□□□□ -1.03
CDH13-208ENST00000566333 LHX5Q9H2C1 402 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 WDR6Q9NNW5 1121 aaKnown RBP8.62□□□□□ -1.03
CDH13-208ENST00000566333 ASAH2Q9NR71 780 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 ABHD10Q9NUJ1 306 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 HESX1Q9UBX0 185 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 USP3Q9Y6I4 520 aa8.62□□□□□ -1.03
CDH13-208ENST00000566333 MIA3Q5JRA6 1907 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 GOLGA6L3A6NEY3 463 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 E5RJQ4 531 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 LSM8O95777 96 aaKnown RBP8.61□□□□□ -1.03
CDH13-208ENST00000566333 F11P03951 625 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 CYP1A1P04798 512 aaPredicted RBP8.61□□□□□ -1.03
CDH13-208ENST00000566333 PLEKP08567 350 aaPredicted RBP8.61□□□□□ -1.03
CDH13-208ENST00000566333 ZDHHC11BP0C7U3 371 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 IL9P15248 144 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 KRT9P35527 623 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 MTHFRP42898 656 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 RGS7P49802 495 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 KIF11P52732 1056 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 CYP4F8P98187 520 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 ADIGQ0VDE8 80 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 SFMBT2Q5VUG0 894 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 PTCRAQ6ISU1 281 aaPredicted RBP8.61□□□□□ -1.03
CDH13-208ENST00000566333 CES5AQ6NT32 575 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 GET4Q7L5D6 327 aaPredicted RBP8.61□□□□□ -1.03
CDH13-208ENST00000566333 ZNF571Q7Z3V5 609 aaPredicted RBP8.61□□□□□ -1.03
CDH13-208ENST00000566333 ZNF677Q86XU0 584 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 NPAS3Q8IXF0 933 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 NUP93Q8N1F7 819 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 ELMOD1Q8N336 334 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 STK32AQ8WU08 396 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 CPLX3Q8WVH0 158 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 ING5Q8WYH8 240 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 KCTD13Q8WZ19 329 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 PIWIL1Q96J94 861 aaKnown RBP8.61□□□□□ -1.03
CDH13-208ENST00000566333 RIPOR3Q96MK2 946 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 NECTIN4Q96NY8 510 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 CPXM1Q96SM3 734 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 PCDHB18PQ96TA0 734 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 SLC4A5Q9BY07 1137 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 UBXN6Q9BZV1 441 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 GMIPQ9P107 970 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 ARHGAP20Q9P2F6 1191 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 NENFQ9UMX5 172 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 SCML2Q9UQR0 700 aa8.61□□□□□ -1.03
CDH13-208ENST00000566333 LUC7L2Q9Y383 392 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms