RNA–Protein interactions for RNA: ENST00000565986.1

PDXDC1-212, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-212ENST00000565986 SIX2Q9NPC8 291 aa13.61□□□□□ -0.23
PDXDC1-212ENST00000565986 COMMD8Q9NX08 183 aa13.61□□□□□ -0.23
PDXDC1-212ENST00000565986 LIMA1Q9UHB6 759 aaKnown RBP13.61□□□□□ -0.23
PDXDC1-212ENST00000565986 TSPAN16Q9UKR8 245 aa13.61□□□□□ -0.23
PDXDC1-212ENST00000565986 TECTAO75443 2155 aa13.61□□□□□ -0.23
PDXDC1-212ENST00000565986 ANAPC1Q9H1A4 1944 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 TRAV19A0A0A6YYK7 116 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 SOBPA7XYQ1 873 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 NARSO43776 548 aaKnown RBP13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 PRAMEF12O95522 483 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 ABL1P00519 1130 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 CKMP06732 381 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 RFX1P22670 979 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 BRD2P25440 801 aaKnown RBP13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 USP8P40818 1118 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 VIPR2P41587 438 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 PDE6CP51160 858 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 BST2Q10589 180 aaKnown RBP13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 STILQ15468 1287 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 NFKBIBQ15653 356 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 TRIM67Q6ZTA4 783 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 GPRIN1Q7Z2K8 1008 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 ANKRD52Q8NB46 1076 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 DEPDC1BQ8WUY9 529 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 OVCA2Q8WZ82 227 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 SLC46A2Q9BY10 475 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 DNAJC12Q9UKB3 198 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 FBXL21Q9UKT6 434 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 CNTN6Q9UQ52 1028 aa13.6□□□□□ -0.23
PDXDC1-212ENST00000565986 ZNF840PA6NDX5 716 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 FAM86C2PA6NEL3 165 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 HEPACAM2A8MVW5 462 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 HHLA1C9JL84 531 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 M0QYV0 167 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 RNF225M0QZC1 329 aaPredicted RBP13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 CAVIN2O95810 425 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 SETSIPP0DME0 302 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 ATP1A3P13637 1013 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 PFKLP17858 780 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 WEE1P30291 646 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 TPM4P67936 248 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 RAPGEF1Q13905 1077 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 GRM2Q14416 872 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 LCLAT1Q6UWP7 414 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 VITQ6UXI7 678 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 TTC30AQ86WT1 665 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 YAF2Q8IY57 180 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 TFAP2BQ92481 460 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 SHC3Q92529 594 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 SMG9Q9H0W8 520 aaKnown RBP13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 HSD3B7Q9H2F3 369 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 KIF9Q9HAQ2 790 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 SLC2A4RGQ9NR83 387 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 IL37Q9NZH6 218 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 GMIPQ9P107 970 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 AJAP1Q9UKB5 411 aaPredicted RBP13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 NCANO14594 1321 aa13.59□□□□□ -0.23
PDXDC1-212ENST00000565986 FAM92AA1XBS5 289 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 C2orf78A6NCI8 922 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 TMEM221A6NGB7 291 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 M0R296 226 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 XPO1O14980 1071 aaKnown RBP13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 CYP26A1O43174 497 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 MED7O43513 233 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 CALCAP01258 141 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 CFHP08603 1231 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 USP17L7P0C7H9 530 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 UCHL3P15374 230 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 PSMC3P17980 439 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 GNA15P30679 374 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 KIF11P52732 1056 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 PFKPQ01813 784 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 UBXN1Q04323 297 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 PDE4CQ08493 712 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 KCNMA1Q12791 1236 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 CNGA2Q16280 664 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 TMEM31Q5JXX7 168 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 KLHDC7AQ5VTJ3 777 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 SMYD5Q6GMV2 418 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 PIGZQ86VD9 579 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 GPIHBP1Q8IV16 184 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 MFSD6LQ8IWD5 586 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 CELF5Q8N6W0 485 aaKnown RBP13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 RSPRY1Q96DX4 576 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 PCMTD1Q96MG8 357 aaPredicted RBP13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 TRMT61BQ9BVS5 477 aaKnown RBP13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 PLA2G2FQ9BZM2 168 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 BRD9Q9H8M2 597 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 CBX8Q9HC52 389 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 PLCB1Q9NQ66 1216 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 FAM207AQ9NSI2 230 aaPredicted RBP13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 TDP1Q9NUW8 608 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 OBP2AQ9NY56 170 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 SCML2Q9UQR0 700 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 FHOD1Q9Y613 1164 aa13.58□□□□□ -0.24
PDXDC1-212ENST00000565986 HELZP42694 1942 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-212ENST00000565986 THAP12O43422 761 aa13.57□□□□□ -0.24
PDXDC1-212ENST00000565986 HDCP19113 662 aa13.57□□□□□ -0.24
PDXDC1-212ENST00000565986 GDI1P31150 447 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms