RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 MIS12Q9H081 205 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 WNT8AQ9H1J5 351 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 EPB41L5Q9HCM4 733 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 PTPN22Q9Y2R2 807 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 RALGAPA2Q2PPJ7 1873 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 EYSQ5T1H1 3165 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 SCN5AQ14524 2016 aa6.56□□□□□ -1.36
CHD9-217ENST00000565832 PDE4DIPQ5VU43 2346 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 PODXLO00592 558 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 HUS1O60921 280 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 NBNO60934 754 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 CABYRO75952 493 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 ZRANB2O95218 330 aaKnown RBP eCLIP6.55□□□□□ -1.36
CHD9-217ENST00000565832 RARAP10276 462 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 KRT10P13645 584 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 BRCC3P46736 316 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 CARSP49589 748 aaKnown RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 CDK7P50613 346 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 UPP1Q16831 310 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 SMTNL2Q2TAL5 461 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 PKDCCQ504Y2 493 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 TIGD5Q53EQ6 642 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 FAM26DQ5JW98 314 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 C8orf74Q6P047 294 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 TMCO3Q6UWJ1 677 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 CD300LGQ6UXG3 332 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 MRPL10Q7Z7H8 261 aaKnown RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 ADGRF2Q8IZF7 708 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 UBL4BQ8N7F7 174 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 PRELID2Q8N945 189 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 C1orf54Q8WWF1 131 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 SCLYQ96I15 445 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 RPGRIP1Q96KN7 1286 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 TSEN34Q9BSV6 310 aaKnown RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 RHOBTB2Q9BYZ6 727 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 TRIM31Q9BZY9 425 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 ZNF518BQ9C0D4 1074 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 CARD9Q9H257 536 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 SNX25Q9H3E2 840 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 RSAD1Q9HA92 442 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 ETNK1Q9HBU6 452 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 MRPL47Q9HD33 250 aaKnown RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 METTL5Q9NRN9 209 aaKnown RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 TMEM30AQ9NV96 361 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 GDAP2Q9NXN4 497 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 RNF14Q9UBS8 474 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 SEPT3Q9UH03 358 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 PCSK1NQ9UHG2 260 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 CEP83Q9Y592 693 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 TDRD15B5MCY1 1934 aaKnown RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 REV3LO60673 3130 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 A0A0U1RQG5 324 aaPredicted RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 MYBPHLA2RUH7 354 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 SIGLEC16A6NMB1 481 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 KBTBD13C9JR72 458 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 CES2O00748 559 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 TTI1O43156 1089 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 ZNF623O75123 536 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 DDHD2O94830 711 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 HEXIM1O94992 359 aaKnown RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 CALB1P05937 261 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 FAM153BP0C7A2 387 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 CCL5P13501 91 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 LCP1P13796 627 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 TFE3P19532 575 aaPredicted RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 IL1R2P27930 398 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 LRPAP1P30533 357 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 NDUFV1P49821 464 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 GATMP50440 423 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 CACNA2D1P54289 1103 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 CCL23P55773 120 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 RWDD2BP57060 319 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 ITIH3Q06033 890 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 SNX1Q13596 522 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 C15orf59Q2T9L4 293 aaPredicted RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 FAM153CQ494X1 144 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 KAZNQ674X7 775 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 OR6B2Q6IFH4 312 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 WDR93Q6P2C0 686 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 TTC27Q6P3X3 843 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 FAM183BPQ6ZVS7 135 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 PAQR9Q6ZVX9 377 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 LIMS2Q7Z4I7 341 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 CTU1Q7Z7A3 348 aaKnown RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 ZNF598Q86UK7 904 aaKnown RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 ECHDC2Q86YB7 292 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 TNS4Q8IZW8 715 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 C3orf20Q8ND61 904 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 DBF4BQ8NFT6 615 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 DIS3LQ8TF46 1054 aaKnown RBP6.55□□□□□ -1.36
CHD9-217ENST00000565832 SLC35F5Q8WV83 523 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 ATG4AQ8WYN0 398 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 RAPGEF5Q92565 580 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 TRIM11Q96F44 468 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 KCNK16Q96T55 309 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 FUT8Q9BYC5 575 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 MAGEB5Q9BZ81 275 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 ZWILCHQ9H900 591 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 ARFGAP3Q9NP61 516 aa6.55□□□□□ -1.36
CHD9-217ENST00000565832 PAK6Q9NQU5 681 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms