RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 HOXB13Q92826 284 aaPredicted RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 HVCN1Q96D96 273 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 TTC1Q99614 292 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 CENPOQ9BU64 300 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 MRPL9Q9BYD2 267 aaKnown RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 HELLSQ9NRZ9 838 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 LANCL2Q9NS86 450 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 TUBA8Q9NY65 449 aaPredicted RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 DPP7Q9UHL4 492 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 AJAP1Q9UKB5 411 aaPredicted RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 APOBEC2Q9Y235 224 aaKnown RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 TMEM98Q9Y2Y6 226 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 KAT6AQ92794 2004 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 ERVV-2B6SEH9 535 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 M0R3H8 397 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 FZD9O00144 591 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 URI1O94763 535 aaPredicted RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 DDX58O95786 925 aaKnown RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 ALAS1P13196 640 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 KRT10P13645 584 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 GYS1P13807 737 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 RPL17P18621 184 aaKnown RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 VCAM1P19320 739 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 PCSK1P29120 753 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 COPAP53621 1224 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 PER3P56645 1201 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 BPIFB3P59826 476 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 TMPRSS15P98073 1019 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 CDK17Q00537 523 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 PPFIA1Q13136 1202 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 INAVAQ3KP66 663 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 BROXQ5VW32 411 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 LMBRD2Q68DH5 695 aaPredicted RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 CYP26C1Q6V0L0 522 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 CCDC73Q6ZRK6 1079 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 CLNKQ7Z7G1 428 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 NBPF5PQ86XG9 351 aaPredicted RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 ERC1Q8IUD2 1116 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 ANKRD18AQ8IVF6 992 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 ZBTB8BQ8NAP8 495 aaPredicted RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 COG1Q8WTW3 980 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 HDAC2Q92769 488 aaKnown RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 SH3KBP1Q96B97 665 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 TBC1D31Q96DN5 1066 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 ZMAT2Q96NC0 199 aaKnown RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 NUDT16L1Q9BRJ7 211 aaKnown RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 CRB3Q9BUF7 120 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 WDR12Q9GZL7 423 aaKnown RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 IFT22Q9H7X7 185 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 ANKEF1Q9NU02 776 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 SEL1LQ9UBV2 794 aa5.27□□□□□ -1.57
CHD9-214ENST00000565119 SAP30BPQ9UHR5 308 aaKnown RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 MAGED1Q9Y5V3 778 aaPredicted RBP5.27□□□□□ -1.57
CHD9-214ENST00000565119 ANKRD18BA2A2Z9 1011 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 TTLL1O95922 423 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 CD4P01730 458 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 HRGP04196 525 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 PPP3CBP16298 524 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 PLIN5Q00G26 463 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 TRIM14Q14142 442 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 PDCD1Q15116 288 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 SEPT7Q16181 437 aaKnown RBP5.26□□□□□ -1.57
CHD9-214ENST00000565119 ZNF449Q6P9G9 518 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 SRGAP1Q7Z6B7 1085 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 MIGA1Q8NAN2 632 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 DEPTORQ8TB45 409 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 TRIM63Q969Q1 353 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 CENPTQ96BT3 561 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 CFAP53Q96M91 514 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 TMEM79Q9BSE2 394 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 TLR10Q9BXR5 811 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 PRSS22Q9GZN4 317 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 LMAN2LQ9H0V9 348 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 DBNDD1Q9H9R9 158 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 TOPORSQ9NS56 1045 aaPredicted RBP5.26□□□□□ -1.57
CHD9-214ENST00000565119 SMC4Q9NTJ3 1288 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 DCAF16Q9NXF7 216 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 RRN3Q9NYV6 651 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 FNIP2Q9P278 1114 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 STAP2Q9UGK3 403 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 PCDHB1Q9Y5F3 818 aa5.26□□□□□ -1.57
CHD9-214ENST00000565119 TCRBV7S2A1N4TA0A589 114 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 MYMKA6NI61 221 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 KCNU1A8MYU2 1149 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 NEMP1O14524 444 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 CPLX1O14810 134 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 GFPT2O94808 682 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 INMTO95050 263 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 TUBB4AP04350 444 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 KIF5BP33176 963 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 LSSP48449 732 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 CCT8P50990 548 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 CCT2P78371 535 aaKnown RBP5.25□□□□□ -1.57
CHD9-214ENST00000565119 OCRLQ01968 901 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 G3BP1Q13283 466 aaKnown RBP eCLIP5.25□□□□□ -1.57
CHD9-214ENST00000565119 PCBP1Q15365 356 aaKnown RBP eCLIP5.25□□□□□ -1.57
CHD9-214ENST00000565119 UGT8Q16880 541 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 ABCB5Q2M3G0 1257 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 HSP90AB3PQ58FF7 597 aa5.25□□□□□ -1.57
CHD9-214ENST00000565119 RILPL1Q5EBL4 403 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms