RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 GRM3Q14832 879 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 MLC1Q15049 377 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 MGAT5BQ3V5L5 792 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 MINDY4Q4G0A6 757 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 ARHGAP29Q52LW3 1261 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 KIRREL2Q6UWL6 708 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 RP9Q8TA86 221 aaKnown RBP3.75□□□□□ -1.81
CHD9-211ENST00000564600 RITA1Q96K30 269 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 ZBTB45Q96K62 511 aaPredicted RBP3.75□□□□□ -1.81
CHD9-211ENST00000564600 SACM1LQ9NTJ5 587 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 ASIC5Q9NY37 505 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 COL20A1Q9P218 1284 aa3.75□□□□□ -1.81
CHD9-211ENST00000564600 DNMT3BQ9UBC3 853 aaKnown RBP3.75□□□□□ -1.81
CHD9-211ENST00000564600 ZNF521Q96K83 1311 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 TCRBV5S1A1TA0A578 114 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 TRIM43BA6NCK2 446 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 CYSRT1A8MQ03 144 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 VSTM5A8MXK1 200 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 PYCARD-AS1I3L0S3 204 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 AGPSO00116 658 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 ADAMTS3O15072 1205 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 EXOC3O60645 756 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 TJP3O95049 919 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 BMP15O95972 392 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 NPSP0C0P6 89 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 IL1R1P14778 569 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 BRAFP15056 766 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 HOXB6P17509 224 aaKnown RBP3.74□□□□□ -1.81
CHD9-211ENST00000564600 EPHB2P29323 1055 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 ALDH5A1P51649 535 aaPredicted RBP3.74□□□□□ -1.81
CHD9-211ENST00000564600 ITGA8P53708 1063 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 PRKAG1P54619 331 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 RPS16P62249 146 aaKnown RBP3.74□□□□□ -1.81
CHD9-211ENST00000564600 TUBA4AP68366 448 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 FMO1Q01740 532 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 SLC10A2Q12908 348 aaPredicted RBP3.74□□□□□ -1.81
CHD9-211ENST00000564600 SLC44A4Q53GD3 710 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 RUSC1-AS1Q66K80 236 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 C11orf87Q6NUJ2 197 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 YTHDF3Q7Z739 585 aaKnown RBP3.74□□□□□ -1.81
CHD9-211ENST00000564600 C14orf80Q86SX3 495 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 SESTD1Q86VW0 696 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 PNLDC1Q8NA58 520 aaKnown RBP3.74□□□□□ -1.81
CHD9-211ENST00000564600 TRIM43Q96BQ3 446 aaPredicted RBP3.74□□□□□ -1.81
CHD9-211ENST00000564600 ZNF518BQ9C0D4 1074 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 XPNPEP3Q9NQH7 507 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 PDGFCQ9NRA1 345 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 CCNL1Q9UK58 526 aaPredicted RBP3.74□□□□□ -1.81
CHD9-211ENST00000564600 CDY1Q9Y6F8 540 aa3.74□□□□□ -1.81
CHD9-211ENST00000564600 TPP1O14773 563 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 SRGAP2O75044 1071 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 XRCC6P12956 609 aaKnown RBP eCLIP3.73□□□□□ -1.81
CHD9-211ENST00000564600 HGFP14210 728 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 RENBPP51606 427 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 TPTEP56180 551 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 HOXA4Q00056 320 aaPredicted RBP3.73□□□□□ -1.81
CHD9-211ENST00000564600 RAB32Q13637 225 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 NPY5RQ15761 445 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 CNGA2Q16280 664 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 AWAT1Q58HT5 328 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 CYB5RLQ6IPT4 315 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 SLC2A7Q6PXP3 512 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 TRIM72Q6ZMU5 477 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 ZNF804AQ7Z570 1209 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 TERB1Q8NA31 727 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 SPSB4Q96A44 273 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 CTHRC1Q96CG8 243 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 C5orf34Q96MH7 638 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 CIPCQ9C0C6 399 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 A1CFQ9NQ94 594 aaKnown RBP3.73□□□□□ -1.81
CHD9-211ENST00000564600 C1orf112Q9NSG2 853 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 TPCN1Q9ULQ1 816 aa3.73□□□□□ -1.81
CHD9-211ENST00000564600 DRG1Q9Y295 367 aaKnown RBP3.73□□□□□ -1.81
CHD9-211ENST00000564600 F8W8V4 182 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 SPRY2O43597 315 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 RRP9O43818 475 aaKnown RBP3.72□□□□□ -1.81
CHD9-211ENST00000564600 FGAP02671 866 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 MYF5P13349 255 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 ZKSCAN1P17029 563 aaPredicted RBP3.72□□□□□ -1.81
CHD9-211ENST00000564600 KELP23276 732 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 UQCRC1P31930 480 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 PTDSS1P48651 473 aaKnown RBP3.72□□□□□ -1.81
CHD9-211ENST00000564600 BCAT1P54687 386 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 KLHL22Q53GT1 634 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 CERCAMQ5T4B2 595 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 RNF220Q5VTB9 566 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 CACHD1Q5VU97 1274 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 SLC18B1Q6NT16 456 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 CATSPERGQ6ZRH7 1159 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 CCDC149Q6ZUS6 474 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 CHST15Q7LFX5 561 aaPredicted RBP3.72□□□□□ -1.81
CHD9-211ENST00000564600 BCDIN3DQ7Z5W3 292 aaKnown RBP3.72□□□□□ -1.81
CHD9-211ENST00000564600 NEK8Q86SG6 692 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 MYO1HQ8N1T3 1032 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 C8orf58Q8NAV2 365 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 ABHD11Q8NFV4 315 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 NMD3Q96D46 503 aaKnown RBP3.72□□□□□ -1.81
CHD9-211ENST00000564600 WDYHV1Q96HA8 205 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 FCRL4Q96PJ5 515 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 MMS19Q96T76 1030 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms