RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ZNF169Q14929 603 aaPredicted RBP5.99□□□□□ -1.45
LINC00254-201ENST00000563416 PTPRRQ15256 657 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 GFOD2Q3B7J2 385 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 PRR16Q569H4 304 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 KAZNQ674X7 775 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 SFRP4Q6FHJ7 346 aaPredicted RBP5.99□□□□□ -1.45
LINC00254-201ENST00000563416 NPNTQ6UXI9 565 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 OVCH2Q7RTZ1 564 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 MYCBPAPQ8TBZ2 947 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 LPIN2Q92539 896 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 B3GNT5Q9BYG0 378 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 HESX1Q9UBX0 185 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 RIPOR2Q9Y4F9 1068 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 INSL6Q9Y581 213 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.99□□□□□ -1.45
LINC00254-201ENST00000563416 WNK3Q9BYP7 1800 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 TNS3Q68CZ2 1445 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 SPATA31A6Q5VVP1 1343 aa5.99□□□□□ -1.45
LINC00254-201ENST00000563416 COL14A1Q05707 1796 aaKnown RBP5.98□□□□□ -1.45
LINC00254-201ENST00000563416 SBNO1A3KN83 1393 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 POLR3AO14802 1390 aaPredicted RBP5.98□□□□□ -1.45
LINC00254-201ENST00000563416 DNAJB5O75953 348 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 NUDT3O95989 172 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 MYBP10242 640 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 LOXL3P58215 753 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 IQCB1Q15051 598 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 LONRF3Q496Y0 759 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 RBM20Q5T481 1227 aaKnown RBP5.98□□□□□ -1.45
LINC00254-201ENST00000563416 KIAA0895LQ68EN5 471 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 ZNF783Q6ZMS7 281 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 MAEAQ7L5Y9 396 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 CCAR1Q8IX12 1150 aaKnown RBP5.98□□□□□ -1.45
LINC00254-201ENST00000563416 OR6B3Q8NGW1 331 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 KBTBD7Q8WVZ9 684 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 LRRC59Q96AG4 307 aaKnown RBP5.98□□□□□ -1.45
LINC00254-201ENST00000563416 MRGPRX1Q96LB2 322 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 SLC46A1Q96NT5 459 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 DUSP26Q9BV47 211 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 SPATA5L1Q9BVQ7 753 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 TTYH3Q9C0H2 523 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 SMOC2Q9H3U7 446 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 MYH16Q9H6N6 1097 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 MRPS18AQ9NVS2 196 aaKnown RBP5.98□□□□□ -1.45
LINC00254-201ENST00000563416 TLK1Q9UKI8 766 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 TMX2Q9Y320 296 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 PAXBP1Q9Y5B6 917 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 ANKRD26Q9UPS8 1709 aa5.98□□□□□ -1.45
LINC00254-201ENST00000563416 BRWD3Q6RI45 1802 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 KIAA0355O15063 1070 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 CYP2C9P11712 490 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 XRCC6P12956 609 aaKnown RBP eCLIP5.97□□□□□ -1.45
LINC00254-201ENST00000563416 PLA2G5P39877 138 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 VIPR2P41587 438 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 CACNB3P54284 484 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 SIM1P81133 766 aaPredicted RBP5.97□□□□□ -1.45
LINC00254-201ENST00000563416 GORABQ5T7V8 394 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 LMBRD2Q68DH5 695 aaPredicted RBP5.97□□□□□ -1.45
LINC00254-201ENST00000563416 PPP4R4Q6NUP7 873 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 CELF5Q8N6W0 485 aaKnown RBP5.97□□□□□ -1.45
LINC00254-201ENST00000563416 FAM136AQ96C01 138 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 ALG8Q9BVK2 526 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 ACTRT3Q9BYD9 372 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 ZMAT3Q9HA38 289 aaKnown RBP5.97□□□□□ -1.45
LINC00254-201ENST00000563416 KLC4Q9NSK0 619 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 GEMIN8Q9NWZ8 242 aaKnown RBP5.97□□□□□ -1.45
LINC00254-201ENST00000563416 COL18A1P39060 1754 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 PPIP5K1Q6PFW1 1433 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 LMO7Q8WWI1 1683 aa5.97□□□□□ -1.45
LINC00254-201ENST00000563416 DISP3Q9P2K9 1392 aa5.96□□□□□ -1.45
LINC00254-201ENST00000563416 TPD52L2O43399 206 aaKnown RBP5.96□□□□□ -1.46
LINC00254-201ENST00000563416 CHRM2P08172 466 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 PXNP49023 591 aaPredicted RBP5.96□□□□□ -1.46
LINC00254-201ENST00000563416 RARRES1P49788 294 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 TOB1P50616 345 aaPredicted RBP5.96□□□□□ -1.46
LINC00254-201ENST00000563416 SLC44A4Q53GD3 710 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 TEDDM1Q5T9Z0 273 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 TMEM108Q6UXF1 575 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 TSHZ1Q6ZSZ6 1077 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 SRGAP1Q7Z6B7 1085 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 GRASPQ7Z6J2 395 aaPredicted RBP5.96□□□□□ -1.46
LINC00254-201ENST00000563416 FMNL3Q8IVF7 1028 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 DNAJC10Q8IXB1 793 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 SIMC1Q8NDZ2 872 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 TFAP2BQ92481 460 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 SUCLG2Q96I99 432 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 PDLIM2Q96JY6 352 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 P2RX7Q99572 595 aaKnown RBP5.96□□□□□ -1.46
LINC00254-201ENST00000563416 CDK19Q9BWU1 502 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 TRIM54Q9BYV2 358 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 SYNPO2LQ9H987 977 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 KIAA1586Q9HCI6 787 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 PRDM11Q9NQV5 511 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 FOXJ2Q9P0K8 574 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 XPR1Q9UBH6 696 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 SHOC2Q9UQ13 582 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.96□□□□□ -1.46
LINC00254-201ENST00000563416 SALL3Q9BXA9 1300 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 CD163L1Q9NR16 1453 aa5.96□□□□□ -1.46
LINC00254-201ENST00000563416 ARHGEF10O15013 1369 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms