RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CCDC142Q17RM4 750 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 C1orf186Q6ZWK4 172 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 SETD7Q8WTS6 366 aaKnown RBP8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 KCNN1Q92952 543 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 FCRL3Q96P31 734 aaPredicted RBP8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 CLMPQ9H6B4 373 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 C17orf75Q9HAS0 396 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 PRDM16Q9HAZ2 1276 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 ARHGEF4Q9NR80 690 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 TM7SF3Q9NS93 570 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 SUSD2Q9UGT4 822 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 CYP8B1Q9UNU6 501 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 KIAA1024Q9UPX6 916 aa8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 FNDC3AQ9Y2H6 1198 aaKnown RBP8.31□□□□□ -1.08
HERPUD1-206ENST00000563343 E9PMD0 336 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 PLK4O00444 970 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 CILPO75339 1184 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 ZNF217O75362 1048 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 CDC45O75419 566 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 CDKL5O76039 1030 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 HOXB2P14652 356 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 CDC25AP30304 524 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 RPL10AP62906 217 aaKnown RBP8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 SLC7A9P82251 487 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 ATP2C1P98194 919 aaPredicted RBP8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 KDSRQ06136 332 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 RESTQ13127 1097 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 KCNB1Q14721 858 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 RINT1Q6NUQ1 792 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 GPR155Q7Z3F1 870 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 KCNK18Q7Z418 384 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 DIS3L2Q8IYB7 885 aaKnown RBP8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 DCP1BQ8IZD4 617 aaKnown RBP8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 RGL4Q8IZJ4 473 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 THEM5Q8N1Q8 247 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 ZNF513Q8N8E2 541 aaPredicted RBP8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 C1orf216Q8TAB5 229 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 ERMNQ8TAM6 284 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 TMC2Q8TDI7 906 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 KCNV2Q8TDN2 545 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 SPIRE2Q8WWL2 714 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 DRC1Q96MC2 740 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 PNMA5Q96PV4 448 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 CDC6Q99741 560 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 PYM1Q9BRP8 204 aaKnown RBP8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 SEMA4CQ9C0C4 833 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 RNF38Q9H0F5 515 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 GAREM1Q9H706 876 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 ABCB6Q9NP58 842 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 DDX19AQ9NUU7 478 aaKnown RBP8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 ORC3Q9UBD5 711 aaPredicted RBP8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 DNMT3LQ9UJW3 386 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 CPSF3Q9UKF6 684 aaKnown RBP8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 STARD13Q9Y3M8 1113 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 PCDHGB2Q9Y5G2 931 aa8.3□□□□□ -1.08
HERPUD1-206ENST00000563343 A0A1B0GTW7 788 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 PYCARD-AS1I3L0S3 204 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 CAPN9O14815 690 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 SCAMP3O14828 347 aaKnown RBP8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 TRIM24O15164 1050 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 OGTO15294 1046 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 FLRT2O43155 660 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 PFKFB2O60825 505 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 OR52Z1P0C646 297 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 ADH5P11766 374 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 HLA-EP13747 358 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 GNSP15586 552 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 PFKLP17858 780 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 GUCY2CP25092 1073 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 NTSR1P30989 418 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 CCT6AP40227 531 aaKnown RBP8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 MATKP42679 507 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 WASP42768 502 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 TAF6P49848 677 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 STRN3Q13033 797 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 PDIA5Q14554 519 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 NFE2Q16621 373 aaPredicted RBP8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 CFAP221Q4G0U5 840 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 HAUS3Q68CZ6 603 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 SLC39A4Q6P5W5 647 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 METTL23Q86XA0 190 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 C4orf32Q8N8J7 132 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 RHBDD1Q8TEB9 315 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 IPO4Q8TEX9 1081 aaKnown RBP8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 ACOX2Q99424 681 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 SLC6A17Q9H1V8 727 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 RPF1Q9H9Y2 349 aaKnown RBP8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 DERAQ9Y315 318 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 NFE2L3Q9Y4A8 694 aa8.29□□□□□ -1.08
HERPUD1-206ENST00000563343 A0A0B4J269 797 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 C2orf72A6NCS6 295 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 GOLGA8CPA6NN73 597 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 KPNA7A9QM74 516 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 TNFSF14O43557 240 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 TULP3O75386 442 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 CER1O95813 267 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 PIGRP01833 764 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 PLS3P13797 630 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms