RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 NEMFO60524 1076 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 GCFC2P16383 781 aaKnown RBP5.71□□□□□ -1.5
CNOT1-205ENST00000563283 TRAPPC10P48553 1259 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 CCL23P55773 120 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 RBL2Q08999 1139 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 SERINC3Q13530 473 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 PLCB4Q15147 1175 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 ZNF174Q15697 407 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 PTGISQ16647 500 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 RILPL1Q5EBL4 403 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 FAM47CQ5HY64 1035 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 FOXB2Q5VYV0 432 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 MOXD1Q6UVY6 613 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 SERINC5Q86VE9 423 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 CCDC60Q8IWA6 550 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-205ENST00000563283 KLHL36Q8N4N3 616 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 GIMAP8Q8ND71 665 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-205ENST00000563283 LMBR1Q8WVP7 490 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 TRAPPC12Q8WVT3 735 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 SEPT1Q8WYJ6 367 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 PTPRN2Q92932 1015 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 ZNF396Q96N95 335 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-205ENST00000563283 SAMD11Q96NU1 681 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 MTMR9Q96QG7 549 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 CEP89Q96ST8 783 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 NAP1L4Q99733 375 aaKnown RBP5.71□□□□□ -1.5
CNOT1-205ENST00000563283 CDC6Q99741 560 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 ZNF577Q9BSK1 485 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 TMEM60Q9H2L4 133 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 UNC45AQ9H3U1 944 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 SMPD4Q9NXE4 827 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 WRAP73Q9P2S5 460 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-205ENST00000563283 SLC9A2Q9UBY0 812 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 DDX25Q9UHL0 483 aaKnown RBP5.71□□□□□ -1.5
CNOT1-205ENST00000563283 PCDHB6Q9Y5E3 794 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 ATP6V1DQ9Y5K8 247 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 EMSYQ7Z589 1322 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 A0A0C4DFX4 3053 aa5.71□□□□□ -1.5
CNOT1-205ENST00000563283 XIRP2A4UGR9 3374 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 MYH9P35579 1960 aaKnown RBP5.7□□□□□ -1.5
CNOT1-205ENST00000563283 MBLAC1A4D2B0 266 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-205ENST00000563283 TMEM150BA6NC51 233 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 GRXCR1A8MXD5 290 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 LAMTOR5O43504 91 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 NBNO60934 754 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 CHRNA1P02708 482 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 OR52Z1P0C646 297 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 IQCF3P0C7M6 154 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 SUPT20HL2P0C7V6 817 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 CKBP12277 381 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 INSRRP14616 1297 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 MARK3P27448 753 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 KRT85P78386 507 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 SETQ01105 290 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-205ENST00000563283 PAK1Q13153 545 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 STK38Q15208 465 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 SF3A1Q15459 793 aaKnown RBP5.7□□□□□ -1.5
CNOT1-205ENST00000563283 IL17AQ16552 155 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 CALCRLQ16602 461 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 LONRF2Q1L5Z9 754 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 SKIDA1Q1XH10 827 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 FAM209AQ5JX71 171 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 TMEM240Q5SV17 173 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 ZNF618Q5T7W0 954 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 CD276Q5ZPR3 534 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 PPP4R3AQ6IN85 833 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 SWSAP1Q6NVH7 229 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 ZNF365Q70YC5 407 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 PLPPR4Q7Z2D5 763 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 MTDHQ86UE4 582 aaKnown RBP5.7□□□□□ -1.5
CNOT1-205ENST00000563283 C7orf31Q8N865 590 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 SH3RF2Q8TEC5 729 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 AFAP1L1Q8TED9 768 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 CDHR1Q96JP9 859 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 EXOC2Q96KP1 924 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 USP28Q96RU2 1077 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 RIT2Q99578 217 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 HIPK3Q9H422 1215 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 CLIC4Q9Y696 253 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 UNC80Q8N2C7 3258 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 EVPLQ92817 2033 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 MROH7Q68CQ1 1323 aa5.7□□□□□ -1.5
CNOT1-205ENST00000563283 KAT6AQ92794 2004 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 A0A087WWV3 80 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 ZNF839A8K0R7 811 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 ACOT7O00154 380 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 CHMP2AO43633 222 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 GAS7O60861 476 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 KLHL18O94889 574 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 BMP15O95972 392 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 CXCL10P02778 98 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 CKMP06732 381 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 NAT1P18440 290 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 MARCKSP29966 332 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-205ENST00000563283 GTF2F1P35269 517 aaKnown RBP eCLIP5.69□□□□□ -1.5
CNOT1-205ENST00000563283 STAT5BP51692 787 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 ATP2C1P98194 919 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-205ENST00000563283 FPGSQ05932 587 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 MGAT3Q09327 533 aa5.69□□□□□ -1.5
CNOT1-205ENST00000563283 NFATC3Q12968 1075 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms