RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	KRT39	Q6A163	491 aa		23.12	■■□□□ 1.29
PPP4C-205	ENST00000563200	CC2D1A	Q6P1N0	951 aa	Predicted RBP	23.12	■■□□□ 1.29
PPP4C-205	ENST00000563200	ZBTB44	Q8NCP5	570 aa		23.12	■■□□□ 1.29
PPP4C-205	ENST00000563200	SMARCD1	Q96GM5	515 aa		23.12	■■□□□ 1.29
PPP4C-205	ENST00000563200	TWNK	Q96RR1	684 aa		23.12	■■□□□ 1.29
PPP4C-205	ENST00000563200	CYP3A43	Q9HB55	503 aa		23.12	■■□□□ 1.29
PPP4C-205	ENST00000563200	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	23.12	■■□□□ 1.29	6e-7	■■■■■ 95.8
PPP4C-205	ENST00000563200	RBM12	Q9NTZ6	932 aa	Known RBP	23.12	■■□□□ 1.29
PPP4C-205	ENST00000563200	HOOK1	Q9UJC3	728 aa	Known RBP	23.12	■■□□□ 1.29
PPP4C-205	ENST00000563200	ATP8B3	O60423	1300 aa		23.12	■■□□□ 1.29
PPP4C-205	ENST00000563200	ANKRD40	Q6AI12	368 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	TSSK4	Q6SA08	328 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	C12orf29	Q8N999	325 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	ZMIZ2	Q8NF64	920 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	SH3RF2	Q8TEC5	729 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	OSCP1	Q8WVF1	389 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	SEMA4D	Q92854	862 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	GTPBP4	Q9BZE4	634 aa	Known RBP	23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	IMPG2	Q9BZV3	1241 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	NIF3L1	Q9GZT8	377 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	RNF38	Q9H0F5	515 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	MMRN2	Q9H8L6	949 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	CSNK1G1	Q9HCP0	422 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	DMAP1	Q9NPF5	467 aa	Predicted RBP	23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	DMXL1	Q9Y485	3027 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	DCHS1	Q96JQ0	3298 aa		23.11	■■□□□ 1.29
PPP4C-205	ENST00000563200	FAM92A	A1XBS5	289 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	OAS1	P00973	400 aa	Known RBP	23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	CCDC130	P13994	396 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	SLC7A9	P82251	487 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	FKBP3	Q00688	224 aa	Known RBP	23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	LRRC32	Q14392	662 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	DGKK	Q5KSL6	1271 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	SCAMP5	Q8TAC9	235 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	SLC2A14	Q8TDB8	520 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	WHAMM	Q8TF30	809 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	SLITRK1	Q96PX8	696 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	SMO	Q99835	787 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	MED10	Q9BTT4	135 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	KRT82	Q9NSB4	513 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	CIZ1	Q9ULV3	898 aa	Predicted RBP	23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	PCDHGA2	Q9Y5H1	932 aa		23.1	■■□□□ 1.29
PPP4C-205	ENST00000563200	SLC16A3	O15427	465 aa	Known RBP	23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	GADD45B	O75293	160 aa	Predicted RBP	23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	AP1G2	O75843	785 aa		23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	BEST1	O76090	585 aa		23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	RTN3	O95197	1032 aa	Predicted RBP	23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	LMNA	P02545	664 aa	Known RBP	23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	EPB41	P11171	864 aa	Known RBP	23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	YWHAQ	P27348	245 aa		23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	LRRC63	Q05C16	580 aa		23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	EML3	Q32P44	896 aa		23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200		Q6ZS52	159 aa		23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	SPEM1	Q8N4L4	309 aa		23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	OVCA2	Q8WZ82	227 aa		23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	DUS2	Q9NX74	493 aa	Known RBP	23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	WNT6	Q9Y6F9	365 aa		23.09	■■□□□ 1.29
PPP4C-205	ENST00000563200	TRIM49B	A6NDI0	452 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	TRDMT1	O14717	391 aa	Known RBP	23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	LILRB5	O75023	590 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	CILP	O75339	1184 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	MXI1	P50539	228 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	CCR3	P51677	355 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	SLC5A3	P53794	718 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	TMEM196	Q5HYL7	178 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	SNX30	Q5VWJ9	437 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	SYNPO	Q8N3V7	929 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	SUMF1	Q8NBK3	374 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	FBXL13	Q8NEE6	735 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	FAXDC2	Q96IV6	333 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	TSG101	Q99816	390 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	NT5C1A	Q9BXI3	368 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	FAM126A	Q9BYI3	521 aa	Predicted RBP	23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	ECT2	Q9H8V3	914 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	FAM49B	Q9NUQ9	324 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	COMMD8	Q9NX08	183 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	ZSCAN32	Q9NX65	697 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	MAN1B1	Q9UKM7	699 aa		23.08	■■□□□ 1.29
PPP4C-205	ENST00000563200	LEFTY2	O00292	366 aa		23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	ZDHHC11B	P0C7U3	371 aa		23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	CD44	P16070	742 aa	Known RBP	23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	BMP6	P22004	513 aa		23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	GJA4	P35212	333 aa		23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	SATB1	Q01826	763 aa		23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	IFRD2	Q12894	506 aa	Predicted RBP	23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	FSTL4	Q6MZW2	842 aa		23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	KIAA1958	Q8N8K9	716 aa		23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	PDZD8	Q8NEN9	1154 aa		23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	HNRNPAB	Q99729	332 aa	Known RBP	23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	RAB20	Q9NX57	234 aa		23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	COQ4	Q9Y3A0	265 aa		23.08	■■□□□ 1.28
PPP4C-205	ENST00000563200	ATG2B	Q96BY7	2078 aa		23.07	■■□□□ 1.28
PPP4C-205	ENST00000563200	DNAH14	Q0VDD8	3507 aa		23.07	■■□□□ 1.28
PPP4C-205	ENST00000563200	STX10	O60499	249 aa		23.07	■■□□□ 1.28
PPP4C-205	ENST00000563200	KIN	O60870	393 aa	Known RBP	23.07	■■□□□ 1.28
PPP4C-205	ENST00000563200	PAPSS2	O95340	614 aa	Predicted RBP	23.07	■■□□□ 1.28
PPP4C-205	ENST00000563200	CXCL12	P48061	93 aa		23.07	■■□□□ 1.28
PPP4C-205	ENST00000563200	CBWD6	Q4V339	395 aa		23.07	■■□□□ 1.28
PPP4C-205	ENST00000563200	CBWD3	Q5JTY5	395 aa		23.07	■■□□□ 1.28
PPP4C-205	ENST00000563200	CBWD5	Q5RIA9	395 aa		23.07	■■□□□ 1.28

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms